RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 SH3KBP1Q96B97 665 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 SCHIP1Q9P0W5 487 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 DRG1Q9Y295 367 aaKnown RBP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 DNAJC16Q9Y2G8 782 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 TMEM150BA6NC51 233 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 STX7O15400 261 aaKnown RBP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 DGKIO75912 1065 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 SUPT7LO94864 414 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 ALDH1A1P00352 501 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 CYP2F1P24903 491 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 LHX1P48742 406 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 GALNT4Q8N4A0 578 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 ZNF555Q8NEP9 628 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 ANKRD27Q96NW4 1050 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 GPR63Q9BZJ6 419 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 ABI2Q9NYB9 513 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 GPR182O15218 404 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 ZNF157P51786 506 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 AMPD2Q01433 879 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 MAP3K10Q02779 954 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 DDR1Q08345 913 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 SEL1L3Q68CR1 1132 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 STRA8Q7Z7C7 330 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 ETNPPLQ8TBG4 499 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 WNK4Q96J92 1243 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 RPRD1AQ96P16 312 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 KCTD10Q9H3F6 313 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 FAM198AQ9UFP1 575 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 MAGEA13PA6NCF6 341 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 JCHAINP01591 159 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 CHRM3P20309 590 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 NDST1P52848 882 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 IRX1P78414 480 aaPredicted RBP17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 BMT2Q1RMZ1 405 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 VSIG10LQ86VR7 867 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 TMEM120AQ9BXJ8 343 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 SHCBP1LQ9BZQ2 653 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 ADARB2Q9NS39 739 aaKnown RBP17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 NCKIPSDQ9NZQ3 722 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 PCYOX1Q9UHG3 505 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 TAGLN3Q9UI15 199 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 DNPEPQ9ULA0 475 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 SOX13Q9UN79 622 aa17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 PRG3Q9Y2Y8 225 aaPredicted RBP17.64■□□□□ 0.42
TRAPPC11-201ENST00000334690 MAGEB16A2A368 324 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 H0Y626 953 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 TRIM16O95361 564 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 HMGCRP04035 888 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 PTPN7P35236 360 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 ERMARDQ5T6L9 678 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 FAM71AQ8IYT1 594 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 ZCCHC9Q8N567 271 aaKnown RBP17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 SHC3Q92529 594 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 ADNPQ9H2P0 1102 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 RRN3Q9NYV6 651 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 APOC4-APOC2K7ER74 178 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 APOC2P02655 101 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 BGNP21810 368 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 AKT1P31749 480 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 TRMT5Q32P41 509 aaKnown RBP17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 PLEKHH3Q7Z736 793 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 HOMEZQ8IX15 550 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 REPS2Q8NFH8 660 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 KAT5Q92993 513 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 FOPNLQ96NB1 174 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 DACH2Q96NX9 599 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 HSD17B14Q9BPX1 270 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 DYRK4Q9NR20 520 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 CHST7Q9NS84 486 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 ANKRD63C9JTQ0 380 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 CXCL11O14625 94 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 LRRC38Q5VT99 294 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 LRRC8BQ6P9F7 803 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 IRF2BP1Q8IU81 584 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 COLGALT1Q8NBJ5 622 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 CENPTQ96BT3 561 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 DTNAQ9Y4J8 743 aa17.64■□□□□ 0.41
TRAPPC11-201ENST00000334690 FKBP6O75344 327 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 THP07101 528 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 SSTR1P30872 391 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 SERPINB10P48595 397 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 NR2C2P49116 596 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 ATXN3P54252 364 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 DSG1Q02413 1049 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 LAYNQ6UX15 382 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 USP13Q92995 863 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 INPP4AQ96PE3 977 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 E7ENQ6 273 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 HNRNPRO43390 633 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 ETFBP38117 255 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 RRP1BQ14684 758 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 HYIQ5T013 277 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 C4orf32Q8N8J7 132 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 TCP10LQ8TDR4 215 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 GLT1D1Q96MS3 346 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 NDUFA13Q9P0J0 144 aa17.63■□□□□ 0.41
TRAPPC11-201ENST00000334690 NCANO14594 1321 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms