RNA–Protein interactions for RNA: ENST00000487159.5

TRAK1-209, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-209ENST00000487159 TMCO3Q6UWJ1 677 aa21.08■□□□□ 0.96
TRAK1-209ENST00000487159 FMNL2Q96PY5 1086 aa21.08■□□□□ 0.96
TRAK1-209ENST00000487159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.08■□□□□ 0.961e-6■■■■■ 131.2
TRAK1-209ENST00000487159 NACADO15069 1562 aa21.08■□□□□ 0.96
TRAK1-209ENST00000487159 FAM193AP78312 1265 aa21.08■□□□□ 0.96
TRAK1-209ENST00000487159 PRKRIP1Q9H875 184 aaPredicted RBP21.07■□□□□ 0.96
TRAK1-209ENST00000487159 RABEP1Q15276 862 aa21.07■□□□□ 0.96
TRAK1-209ENST00000487159 UBXN4Q92575 508 aa21.06■□□□□ 0.96
TRAK1-209ENST00000487159 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
TRAK1-209ENST00000487159 FOSBP53539 338 aa21.06■□□□□ 0.96
TRAK1-209ENST00000487159 ZFYVE27Q5T4F4 411 aa21.06■□□□□ 0.96
TRAK1-209ENST00000487159 SAFBQ15424 915 aaKnown RBP eCLIP21.06■□□□□ 0.96
TRAK1-209ENST00000487159 TAX1BP1Q86VP1 789 aa21.06■□□□□ 0.96
TRAK1-209ENST00000487159 CCDC192P0DO97 292 aa21.06■□□□□ 0.96
TRAK1-209ENST00000487159 TNNT1P13805 278 aa21.05■□□□□ 0.96
TRAK1-209ENST00000487159 IRX3P78415 501 aaPredicted RBP21.05■□□□□ 0.96
TRAK1-209ENST00000487159 PKD2Q13563 968 aa21.05■□□□□ 0.96
TRAK1-209ENST00000487159 DDX11Q96FC9 970 aa21.05■□□□□ 0.96
TRAK1-209ENST00000487159 CCDC9Q9Y3X0 531 aaKnown RBP21.05■□□□□ 0.96
TRAK1-209ENST00000487159 FOXD1Q16676 465 aa21.04■□□□□ 0.96
TRAK1-209ENST00000487159 EPS15P42566 896 aa21.04■□□□□ 0.96
TRAK1-209ENST00000487159 SEPT7Q16181 437 aaKnown RBP21.04■□□□□ 0.96
TRAK1-209ENST00000487159 DZIP1LQ8IYY4 767 aaKnown RBP21.04■□□□□ 0.96
TRAK1-209ENST00000487159 FAM107BQ9H098 131 aa21.04■□□□□ 0.96
TRAK1-209ENST00000487159 ANKRD62A6NC57 917 aa21.03■□□□□ 0.96
TRAK1-209ENST00000487159 ELL2O00472 640 aaPredicted RBP21.03■□□□□ 0.96
TRAK1-209ENST00000487159 CCDC27Q2M243 656 aa21.03■□□□□ 0.96
TRAK1-209ENST00000487159 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
TRAK1-209ENST00000487159 CCDC181Q5TID7 509 aa21.03■□□□□ 0.96
TRAK1-209ENST00000487159 CDC45O75419 566 aa21.03■□□□□ 0.96
TRAK1-209ENST00000487159 TRDNQ13061 729 aa21.02■□□□□ 0.96
TRAK1-209ENST00000487159 LNPKQ9C0E8 428 aa21.02■□□□□ 0.96
TRAK1-209ENST00000487159 GTF2A1P52655 376 aaPredicted RBP21.02■□□□□ 0.96
TRAK1-209ENST00000487159 KANK1Q14678 1352 aa21.02■□□□□ 0.96
TRAK1-209ENST00000487159 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
TRAK1-209ENST00000487159 EZRP15311 586 aaKnown RBP21.02■□□□□ 0.95
TRAK1-209ENST00000487159 FAM177A1Q8N128 213 aaPredicted RBP21.02■□□□□ 0.95
TRAK1-209ENST00000487159 KIF7Q2M1P5 1343 aa21.02■□□□□ 0.95
TRAK1-209ENST00000487159 ANKRD18AQ8IVF6 992 aa21.01■□□□□ 0.95
TRAK1-209ENST00000487159 TIGD1Q96MW7 591 aa21■□□□□ 0.95
TRAK1-209ENST00000487159 FIBPO43427 364 aa21■□□□□ 0.95
TRAK1-209ENST00000487159 SERPINC1P01008 464 aa21■□□□□ 0.95
TRAK1-209ENST00000487159 GTF2F1P35269 517 aaKnown RBP eCLIP20.99■□□□□ 0.952e-6■■■□□ 14.6
TRAK1-209ENST00000487159 BRPF1P55201 1214 aaPredicted RBP20.99■□□□□ 0.95
TRAK1-209ENST00000487159 DNAJC2Q99543 621 aaKnown RBP20.99■□□□□ 0.95
TRAK1-209ENST00000487159 IFIT2P09913 472 aaKnown RBP20.99■□□□□ 0.95
TRAK1-209ENST00000487159 RBM33Q96EV2 1170 aaKnown RBP20.99■□□□□ 0.95
TRAK1-209ENST00000487159 GBP3Q9H0R5 595 aa20.99■□□□□ 0.95
TRAK1-209ENST00000487159 NFXL1Q6ZNB6 911 aa20.99■□□□□ 0.95
TRAK1-209ENST00000487159 ZNHIT6Q9NWK9 470 aaKnown RBP20.99■□□□□ 0.95
TRAK1-209ENST00000487159 IQCEQ6IPM2 695 aa20.98■□□□□ 0.95
TRAK1-209ENST00000487159 STK26Q9P289 416 aa20.98■□□□□ 0.95
TRAK1-209ENST00000487159 AAMPQ13685 434 aa20.98■□□□□ 0.95
TRAK1-209ENST00000487159 TCEAL9Q9UHQ7 104 aa20.98■□□□□ 0.95
TRAK1-209ENST00000487159 CRACR2AQ9BSW2 395 aa20.97■□□□□ 0.95
TRAK1-209ENST00000487159 MCM2P49736 904 aa20.97■□□□□ 0.95
TRAK1-209ENST00000487159 PPFIBP1Q86W92 1011 aa20.97■□□□□ 0.95
TRAK1-209ENST00000487159 TRIM34Q9BYJ4 488 aa20.96■□□□□ 0.95
TRAK1-209ENST00000487159 MCM4P33991 863 aa20.96■□□□□ 0.95
TRAK1-209ENST00000487159 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
TRAK1-209ENST00000487159 TMX4Q9H1E5 349 aaPredicted RBP20.96■□□□□ 0.95
TRAK1-209ENST00000487159 PIP4K2AP48426 406 aaPredicted RBP20.96■□□□□ 0.95
TRAK1-209ENST00000487159 GOLGA6L10A0A0M3HER8 536 aa20.95■□□□□ 0.94
TRAK1-209ENST00000487159 PDCP20941 246 aa20.95■□□□□ 0.94
TRAK1-209ENST00000487159 KIF2AO00139 706 aaPredicted RBP20.94■□□□□ 0.94
TRAK1-209ENST00000487159 MNAT1P51948 309 aa20.94■□□□□ 0.94
TRAK1-209ENST00000487159 L3MBTL2Q969R5 705 aa20.94■□□□□ 0.94
TRAK1-209ENST00000487159 MAGEC2Q9UBF1 373 aaPredicted RBP20.94■□□□□ 0.94
TRAK1-209ENST00000487159 API5Q9BZZ5 524 aaKnown RBP20.94■□□□□ 0.94
TRAK1-209ENST00000487159 LRRFIP2Q9Y608 721 aaKnown RBP20.94■□□□□ 0.94
TRAK1-209ENST00000487159 TNMDQ9H2S6 317 aa20.94■□□□□ 0.94
TRAK1-209ENST00000487159 TERF2IPQ9NYB0 399 aa20.94■□□□□ 0.94
TRAK1-209ENST00000487159 POLR3GO15318 223 aaPredicted RBP20.94■□□□□ 0.94
TRAK1-209ENST00000487159 NF2P35240 595 aa20.94■□□□□ 0.94
TRAK1-209ENST00000487159 MICALCLQ6ZW33 695 aa20.94■□□□□ 0.94
TRAK1-209ENST00000487159 CWC22Q9HCG8 908 aaKnown RBP20.94■□□□□ 0.94
TRAK1-209ENST00000487159 PPP4R3BQ5MIZ7 849 aa20.93■□□□□ 0.94
TRAK1-209ENST00000487159 LUC7LQ9NQ29 371 aaKnown RBP20.93■□□□□ 0.94
TRAK1-209ENST00000487159 NEK4P51957 841 aa20.92■□□□□ 0.94
TRAK1-209ENST00000487159 SLC26A8Q96RN1 970 aa20.92■□□□□ 0.94
TRAK1-209ENST00000487159 ERICH2A1L162 156 aa20.92■□□□□ 0.94
TRAK1-209ENST00000487159 DNAAF4Q8WXU2 420 aa20.92■□□□□ 0.94
TRAK1-209ENST00000487159 APAF1O14727 1248 aa20.91■□□□□ 0.94
TRAK1-209ENST00000487159 FILIP1Q7Z7B0 1213 aa20.91■□□□□ 0.94
TRAK1-209ENST00000487159 MAP2K1Q02750 393 aaPredicted RBP20.91■□□□□ 0.94
TRAK1-209ENST00000487159 ZNF526Q8TF50 670 aaPredicted RBP20.91■□□□□ 0.94
TRAK1-209ENST00000487159 ROCK1Q13464 1354 aa20.91■□□□□ 0.94
TRAK1-209ENST00000487159 CSB-PGBD3P0DP91 1061 aa20.91■□□□□ 0.94
TRAK1-209ENST00000487159 PSMA5P28066 241 aa20.91■□□□□ 0.94
TRAK1-209ENST00000487159 BACH2Q9BYV9 841 aa20.91■□□□□ 0.94
TRAK1-209ENST00000487159 CBFA2T2O43439 604 aa20.91■□□□□ 0.94
TRAK1-209ENST00000487159 RNF187Q5TA31 235 aaPredicted RBP20.91■□□□□ 0.94
TRAK1-209ENST00000487159 TXLNBQ8N3L3 684 aa20.91■□□□□ 0.94
TRAK1-209ENST00000487159 NOL10Q9BSC4 688 aaKnown RBP20.9■□□□□ 0.94
TRAK1-209ENST00000487159 NGEFQ8N5V2 710 aa20.9■□□□□ 0.94
TRAK1-209ENST00000487159 CFAP45Q9UL16 551 aa20.9■□□□□ 0.94
TRAK1-209ENST00000487159 DHX16O60231 1041 aaKnown RBP20.89■□□□□ 0.94
TRAK1-209ENST00000487159 PTPN14Q15678 1187 aa20.89■□□□□ 0.94
TRAK1-209ENST00000487159 FHAD1B1AJZ9 1412 aa20.89■□□□□ 0.94
TRAK1-209ENST00000487159 XPCQ01831 940 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms