RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 NUTM2AQ8IVF1 878 aaPredicted RBP20.75■□□□□ 0.91
COL27A1-201ENST00000356083 IPO9Q96P70 1041 aaKnown RBP20.75■□□□□ 0.91
COL27A1-201ENST00000356083 KIF27Q86VH2 1401 aa20.75■□□□□ 0.91
COL27A1-201ENST00000356083 HSP90AB4PQ58FF6 505 aa20.75■□□□□ 0.91
COL27A1-201ENST00000356083 SDF4Q9BRK5 362 aa20.75■□□□□ 0.91
COL27A1-201ENST00000356083 MAGEC2Q9UBF1 373 aaPredicted RBP20.75■□□□□ 0.91
COL27A1-201ENST00000356083 ACBD3Q9H3P7 528 aa20.75■□□□□ 0.91
COL27A1-201ENST00000356083 HMGN5P82970 282 aaKnown RBP20.74■□□□□ 0.91
COL27A1-201ENST00000356083 CCDC73Q6ZRK6 1079 aa20.74■□□□□ 0.91
COL27A1-201ENST00000356083 TAX1BP1Q86VP1 789 aa20.74■□□□□ 0.91
COL27A1-201ENST00000356083 SEPT11Q9NVA2 429 aaKnown RBP20.73■□□□□ 0.91
COL27A1-201ENST00000356083 CEBPZQ03701 1054 aaKnown RBP20.73■□□□□ 0.91
COL27A1-201ENST00000356083 AXDND1Q5T1B0 1012 aaPredicted RBP20.73■□□□□ 0.91
COL27A1-201ENST00000356083 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
COL27A1-201ENST00000356083 STRN4Q9NRL3 753 aa20.73■□□□□ 0.91
COL27A1-201ENST00000356083 REC8O95072 547 aa20.71■□□□□ 0.91
COL27A1-201ENST00000356083 RAPGEF4Q8WZA2 1011 aa20.71■□□□□ 0.91
COL27A1-201ENST00000356083 SSR1P43307 286 aaKnown RBP20.71■□□□□ 0.91
COL27A1-201ENST00000356083 ZSCAN29Q8IWY8 852 aaPredicted RBP20.7■□□□□ 0.9
COL27A1-201ENST00000356083 SMC2O95347 1197 aa20.7■□□□□ 0.9
COL27A1-201ENST00000356083 TTC16Q8NEE8 873 aa20.7■□□□□ 0.9
COL27A1-201ENST00000356083 COG6Q9Y2V7 657 aa20.7■□□□□ 0.9
COL27A1-201ENST00000356083 RBM42Q9BTD8 480 aaKnown RBP20.7■□□□□ 0.9
COL27A1-201ENST00000356083 HMOX1P09601 288 aa20.69■□□□□ 0.9
COL27A1-201ENST00000356083 ARGLU1Q9NWB6 273 aaPredicted RBP20.69■□□□□ 0.9
COL27A1-201ENST00000356083 TSPYL4Q9UJ04 414 aa20.69■□□□□ 0.9
COL27A1-201ENST00000356083 TANGO6Q9C0B7 1094 aa20.68■□□□□ 0.9
COL27A1-201ENST00000356083 NLRP2Q9NX02 1062 aa20.68■□□□□ 0.9
COL27A1-201ENST00000356083 WASHC2AQ641Q2 1341 aa20.68■□□□□ 0.9
COL27A1-201ENST00000356083 KIF6Q6ZMV9 814 aa20.68■□□□□ 0.9
COL27A1-201ENST00000356083 DNAJC2Q99543 621 aaKnown RBP20.67■□□□□ 0.9
COL27A1-201ENST00000356083 CHMP5Q9NZZ3 219 aa20.67■□□□□ 0.9
COL27A1-201ENST00000356083 EFCAB2Q5VUJ9 269 aa20.67■□□□□ 0.9
COL27A1-201ENST00000356083 CT47B1P0C2W7 299 aaPredicted RBP20.66■□□□□ 0.9
COL27A1-201ENST00000356083 SKOR2Q2VWA4 1001 aaPredicted RBP20.66■□□□□ 0.9
COL27A1-201ENST00000356083 PIP4K2BP78356 416 aa20.66■□□□□ 0.9
COL27A1-201ENST00000356083 TXLNAP40222 546 aa20.66■□□□□ 0.9
COL27A1-201ENST00000356083 PIBF1Q8WXW3 757 aa20.66■□□□□ 0.9
COL27A1-201ENST00000356083 NAT10Q9H0A0 1025 aaKnown RBP20.66■□□□□ 0.9
COL27A1-201ENST00000356083 ERLIN2O94905 339 aa20.66■□□□□ 0.9
COL27A1-201ENST00000356083 SART3Q15020 963 aaKnown RBP20.66■□□□□ 0.9
COL27A1-201ENST00000356083 ANKRD18AQ8IVF6 992 aa20.66■□□□□ 0.9
COL27A1-201ENST00000356083 MPHOSPH9Q99550 1183 aa20.65■□□□□ 0.9
COL27A1-201ENST00000356083 SLC3A2P08195 630 aaKnown RBP20.65■□□□□ 0.9
COL27A1-201ENST00000356083 DEF6Q9H4E7 631 aa20.65■□□□□ 0.9
COL27A1-201ENST00000356083 ZKSCAN2Q63HK3 967 aa20.64■□□□□ 0.9
COL27A1-201ENST00000356083 CCDC181Q5TID7 509 aa20.64■□□□□ 0.9
COL27A1-201ENST00000356083 FAM177A1Q8N128 213 aaPredicted RBP20.64■□□□□ 0.9
COL27A1-201ENST00000356083 CNNM1Q9NRU3 951 aa20.64■□□□□ 0.89
COL27A1-201ENST00000356083 GBP2P32456 591 aaPredicted RBP20.64■□□□□ 0.89
COL27A1-201ENST00000356083 TBC1D2BQ9UPU7 963 aa20.63■□□□□ 0.89
COL27A1-201ENST00000356083 CLASRPQ8N2M8 674 aaKnown RBP20.63■□□□□ 0.89
COL27A1-201ENST00000356083 RIPK4P57078 832 aa20.62■□□□□ 0.89
COL27A1-201ENST00000356083 PANK3Q9H999 370 aa20.62■□□□□ 0.89
COL27A1-201ENST00000356083 CA8P35219 290 aa20.62■□□□□ 0.89
COL27A1-201ENST00000356083 FILIP1LQ4L180 1135 aa20.62■□□□□ 0.89
COL27A1-201ENST00000356083 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
COL27A1-201ENST00000356083 GOLGA6L10A6NI86 522 aa20.62■□□□□ 0.89
COL27A1-201ENST00000356083 SSBP05455 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL27A1-201ENST00000356083 ARHGAP35Q9NRY4 1499 aa20.61■□□□□ 0.89
COL27A1-201ENST00000356083 CRBNQ96SW2 442 aa20.61■□□□□ 0.89
COL27A1-201ENST00000356083 ERC2O15083 957 aa20.61■□□□□ 0.89
COL27A1-201ENST00000356083 SMARCE1Q969G3 411 aa20.61■□□□□ 0.89
COL27A1-201ENST00000356083 RNF214Q8ND24 703 aa20.61■□□□□ 0.89
COL27A1-201ENST00000356083 LNPKQ9C0E8 428 aa20.6■□□□□ 0.89
COL27A1-201ENST00000356083 FAM193AP78312 1265 aa20.6■□□□□ 0.89
COL27A1-201ENST00000356083 EZRP15311 586 aaKnown RBP20.6■□□□□ 0.89
COL27A1-201ENST00000356083 NF2P35240 595 aa20.6■□□□□ 0.89
COL27A1-201ENST00000356083 SPC24Q8NBT2 197 aa20.6■□□□□ 0.89
COL27A1-201ENST00000356083 WDR78Q5VTH9 848 aa20.59■□□□□ 0.89
COL27A1-201ENST00000356083 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
COL27A1-201ENST00000356083 ANAPC15P60006 121 aa20.58■□□□□ 0.89
COL27A1-201ENST00000356083 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.89
COL27A1-201ENST00000356083 KANK4Q5T7N3 995 aaPredicted RBP20.58■□□□□ 0.88
COL27A1-201ENST00000356083 TAF3Q5VWG9 929 aa20.58■□□□□ 0.88
COL27A1-201ENST00000356083 TRIM5Q9C035 493 aa20.58■□□□□ 0.88
COL27A1-201ENST00000356083 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.88
COL27A1-201ENST00000356083 TTLL12Q14166 644 aaPredicted RBP20.57■□□□□ 0.88
COL27A1-201ENST00000356083 EVC2Q86UK5 1308 aa20.57■□□□□ 0.88
COL27A1-201ENST00000356083 GOLGA6L10A0A0M3HER8 536 aa20.57■□□□□ 0.88
COL27A1-201ENST00000356083 ZNF76P36508 570 aa20.57■□□□□ 0.88
COL27A1-201ENST00000356083 SCLT1Q96NL6 688 aa20.57■□□□□ 0.88
COL27A1-201ENST00000356083 CCER2I3L3R5 266 aa20.56■□□□□ 0.88
COL27A1-201ENST00000356083 USP5P45974 858 aa20.56■□□□□ 0.88
COL27A1-201ENST00000356083 FSD1Q9BTV5 496 aa20.56■□□□□ 0.88
COL27A1-201ENST00000356083 CUX2O14529 1486 aa20.56■□□□□ 0.88
COL27A1-201ENST00000356083 TTC39AQ5SRH9 613 aa20.56■□□□□ 0.88
COL27A1-201ENST00000356083 INTS3Q68E01 1043 aaKnown RBP20.56■□□□□ 0.88
COL27A1-201ENST00000356083 PUS7Q96PZ0 661 aaKnown RBP20.56■□□□□ 0.88
COL27A1-201ENST00000356083 ZNHIT6Q9NWK9 470 aaKnown RBP20.56■□□□□ 0.88
COL27A1-201ENST00000356083 LRRFIP2Q9Y608 721 aaKnown RBP20.56■□□□□ 0.88
COL27A1-201ENST00000356083 CENPQQ7L2Z9 268 aaPredicted RBP20.55■□□□□ 0.88
COL27A1-201ENST00000356083 ERC1Q8IUD2 1116 aa20.55■□□□□ 0.88
COL27A1-201ENST00000356083 DESP17661 470 aa20.55■□□□□ 0.88
COL27A1-201ENST00000356083 DDX54Q8TDD1 881 aaKnown RBP20.55■□□□□ 0.88
COL27A1-201ENST00000356083 KINO60870 393 aaKnown RBP20.55■□□□□ 0.88
COL27A1-201ENST00000356083 NUP133Q8WUM0 1156 aa20.54■□□□□ 0.88
COL27A1-201ENST00000356083 ERCC4Q92889 916 aaPredicted RBP20.54■□□□□ 0.88
COL27A1-201ENST00000356083 CCDC112Q8NEF3 446 aa20.54■□□□□ 0.88
COL27A1-201ENST00000356083 STK3Q13188 491 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms