RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 FAM46DQ8NEK8 389 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 SUPT20HQ8NEM7 779 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 LINC00476Q8WZB0 136 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 P2RX7Q99572 595 aaKnown RBP4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 CASS4Q9NQ75 786 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 INTS13Q9NVM9 706 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 MED16Q9Y2X0 877 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 EPN1Q9Y6I3 576 aaPredicted RBP4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 KIAA1551Q9HCM1 1747 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 MAST3O60307 1309 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 FRMPD2Q68DX3 1309 aaPredicted RBP4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 NRXN2Q9P2S2 1712 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 RNMTO43148 476 aaKnown RBP4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 PHGDHO43175 533 aaKnown RBP4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 RAMP2O60895 175 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 UNC5CO95185 931 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 THP07101 528 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 HMOX1P09601 288 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 NPR1P16066 1061 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 PPP2R1AP30153 589 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 ARFIP2P53365 341 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 SEC24CP53992 1094 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 BOP1Q14137 746 aaKnown RBP4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 SF3B3Q15393 1217 aaKnown RBP4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 MTHFSDQ2M296 383 aaKnown RBP4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 PREPLQ4J6C6 727 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 SRGAP1Q7Z6B7 1085 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 LNX2Q8N448 690 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 BEND2Q8NDZ0 799 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 IL31RAQ8NI17 732 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 SNX19Q92543 992 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 CAVIN3Q969G5 261 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 CFAP53Q96M91 514 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 MRIQ9BWK5 157 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 SMOC2Q9H3U7 446 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 PACSIN3Q9UKS6 424 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 NUDCQ9Y266 331 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 PLEKHM1Q9Y4G2 1056 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 RAD54BQ9Y620 910 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 KCPQ6ZWJ8 1503 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 KDM3BQ7LBC6 1761 aa4.44□□□□□ -1.7
CKS1BP3-201ENST00000600888 CEMIPQ8WUJ3 1361 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 LAMB4A4D0S4 1761 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 N4BP2Q86UW6 1770 aaPredicted RBP4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 DLEC1Q9Y238 1755 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 CFAP69A5D8W1 941 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 F5H697 171 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 HTATSF1O43719 755 aaKnown RBP4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 MARCH6O60337 910 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 SOAT2O75908 522 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 ESRRBO95718 433 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 ZBED1O96006 694 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 HRGP04196 525 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 GRPP07492 148 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 SRGNP10124 158 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 CHRM3P20309 590 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 MPLP40238 635 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 NPTX2P47972 431 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 FSTL1Q12841 308 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 FOXI1Q12951 378 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 CNN3Q15417 329 aaKnown RBP4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 HECTD2Q5U5R9 776 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 RNF220Q5VTB9 566 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 Q6ZNX1 250 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 CCDC149Q6ZUS6 474 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 FAM156AQ8NDB6 213 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 SLC30A5Q8TAD4 765 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 SSH3Q8TE77 659 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 KBTBD7Q8WVZ9 684 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 ANKS1AQ92625 1134 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 CHFRQ96EP1 664 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 HEPHQ9BQS7 1158 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 AIFM2Q9BRQ8 373 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 TRIM54Q9BYV2 358 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 C22orf23Q9BZE7 217 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 IKZF4Q9H2S9 585 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 TOR3AQ9H497 397 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 KCTD5Q9NXV2 234 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 HESX1Q9UBX0 185 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 DMTF1Q9Y222 760 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 SBF1O95248 1867 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 UTRNP46939 3433 aa4.43□□□□□ -1.7
CKS1BP3-201ENST00000600888 BCORQ6W2J9 1755 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 SCN7AQ01118 1682 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 POLR2AP24928 1970 aaKnown RBP4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 A0A087X1B8 175 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 A0A0B4J269 797 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 BTN3A1O00481 513 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 TPP1O14773 563 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 TRIAP1O43715 76 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 RHOBTB3O94955 611 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 ITGALP20701 1170 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 PROZP22891 400 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 SLC7A1P30825 629 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 CRKLP46109 303 aaKnown RBP4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 GCLCP48506 637 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms