RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CYP1B1Q16678 543 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 P3H1Q32P28 736 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SUPT20HL1Q3ZLR7 823 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SPDYCQ5MJ68 293 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 ANGEL2Q5VTE6 544 aaKnown RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 C6orf89Q6UWU4 347 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 FAM47EQ6ZV65 393 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 REC114Q7Z4M0 266 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 YTHDF3Q7Z739 585 aaKnown RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 SCYL3Q8IZE3 742 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 CCDC63Q8NA47 563 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 FBXL18Q96ME1 805 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 NTPCRQ9BSD7 190 aaKnown RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 APOBEC3GQ9HC16 384 aaKnown RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 TIMMDC1Q9NPL8 285 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 WHRNQ9P202 907 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 AGTPBP1Q9UPW5 1226 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 NUB1Q9Y5A7 615 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SRCAPQ6ZRS2 3230 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 PTPRJQ12913 1337 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 MYPNQ86TC9 1320 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 PMM2O15305 246 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SPAG7O75391 227 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 PAEPP09466 180 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 UNGP13051 313 aaPredicted RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 GLRA2P23416 452 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 RPL7AP62424 266 aaKnown RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 PSMD6Q15008 389 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 CNGA2Q16280 664 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SLFN12LQ6IEE8 588 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 XRRA1Q6P2D8 792 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 NCAPG2Q86XI2 1143 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ABRAQ8N0Z2 381 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 C3orf20Q8ND61 904 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 MCEEQ96PE7 176 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 RBM15Q96T37 977 aaKnown RBP eCLIP5.63□□□□□ -1.51
VAPA-203ENST00000577539 CYP39A1Q9NYL5 469 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 NINJ2Q9NZG7 142 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ARHGAP28Q9P2N2 729 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 EXOC1LA0A1B0GW35 172 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 TTLL8A6PVC2 850 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 RASA4BC9J798 803 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SGK1O00141 431 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 C2CD2LO14523 706 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 RASA4O43374 803 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ZC3H11AO75152 810 aaKnown RBP eCLIP5.63□□□□□ -1.51
VAPA-203ENST00000577539 PTPRAP18433 802 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 PSMC4P43686 418 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 NOMO3P69849 1222 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 FSTL1Q12841 308 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 GPS1Q13098 491 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 MAMLD1Q13495 774 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 CYP4A22Q5TCH4 519 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 LRRC71Q8N4P6 559 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ZNF513Q8N8E2 541 aaPredicted RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 FEZF2Q8TBJ5 459 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ATXN2LQ8WWM7 1075 aaKnown RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 ZNF606Q8WXB4 792 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 KLHL6Q8WZ60 621 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 PPP1R16BQ96T49 567 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ROPN1BQ9BZX4 212 aaPredicted RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 ADAM7Q9H2U9 754 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ZWILCHQ9H900 591 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ROPN1Q9HAT0 212 aaPredicted RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 NRBP2Q9NSY0 501 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SOX13Q9UN79 622 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 CEP83Q9Y592 693 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SCINQ9Y6U3 715 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ZNF541Q9H0D2 1346 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 INO80B-WBP1J3KQ70 363 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SUN1O94901 812 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 VNN1O95497 513 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 C4BPAP04003 597 aaKnown RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 TMEM191BP0C7N4 346 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ETS1P14921 441 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 TCF4P15884 667 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 TNFSF9P41273 254 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SMCPP49901 116 aaPredicted RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 ARSEP51690 589 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 LACTBP83111 547 aaPredicted RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 SP2Q02086 613 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 DRP2Q13474 957 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 PWP1Q13610 501 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 PTK6Q13882 451 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SNCBQ16143 134 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SEPT7Q16181 437 aaKnown RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 CYB5D1Q6P9G0 228 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 MFSD7Q6UXD7 560 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ABHD15Q6UXT9 468 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 TRPM8Q7Z2W7 1104 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ZNF677Q86XU0 584 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 CENPTQ96BT3 561 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 TBC1D31Q96DN5 1066 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 NLRP4Q96MN2 994 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 MTMR12Q9C0I1 747 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 C10orf88Q9H8K7 445 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 AAASQ9NRG9 546 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 ABCF3Q9NUQ8 709 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 PARVAQ9NVD7 372 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms