RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ZNF274Q96GC6 653 aaPredicted RBP16.31■□□□□ 0.2
U2AF1-211ENST00000486519 DDX19AQ9NUU7 478 aaKnown RBP16.31■□□□□ 0.2
U2AF1-211ENST00000486519 GTF3C4Q9UKN8 822 aa16.31■□□□□ 0.2
U2AF1-211ENST00000486519 PRRT4C9JH25 899 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 ADH1CP00326 375 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
U2AF1-211ENST00000486519 RPL10AP62906 217 aaKnown RBP16.3■□□□□ 0.2
U2AF1-211ENST00000486519 SLC7A9P82251 487 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 RAD51AP2Q09MP3 1159 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 PREPLQ4J6C6 727 aaPredicted RBP16.3■□□□□ 0.2
U2AF1-211ENST00000486519 ZPBP2Q6X784 338 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 PRICKLE2Q7Z3G6 844 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 KCNK18Q7Z418 384 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 LEO1Q8WVC0 666 aaPredicted RBP16.3■□□□□ 0.2
U2AF1-211ENST00000486519 FGF11Q92914 225 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 WBP1Q96G27 269 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 TMEM176AQ96HP8 235 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 ZFRQ96KR1 1074 aaKnown RBP16.3■□□□□ 0.2
U2AF1-211ENST00000486519 GABRG3Q99928 467 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 RPF1Q9H9Y2 349 aaKnown RBP16.3■□□□□ 0.2
U2AF1-211ENST00000486519 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
U2AF1-211ENST00000486519 PLXNA2O75051 1894 aa16.3■□□□□ 0.2
U2AF1-211ENST00000486519 BSNQ9UPA5 3926 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.29■□□□□ 0.2
U2AF1-211ENST00000486519 H0Y8X5 98 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 XPOTO43592 962 aaKnown RBP16.29■□□□□ 0.2
U2AF1-211ENST00000486519 OLFM2O95897 454 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 FDPSP14324 419 aaKnown RBP16.29■□□□□ 0.2
U2AF1-211ENST00000486519 TAF6P49848 677 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 STRN3Q13033 797 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 SF3A1Q15459 793 aaKnown RBP16.29■□□□□ 0.2
U2AF1-211ENST00000486519 INTS6LQ5JSJ4 861 aaKnown RBP16.29■□□□□ 0.2
U2AF1-211ENST00000486519 HES3Q5TGS1 186 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 IL27RAQ6UWB1 636 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 C1orf186Q6ZWK4 172 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 TRMT11Q7Z4G4 463 aaKnown RBP16.29■□□□□ 0.2
U2AF1-211ENST00000486519 CHPFQ8IZ52 775 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 PDCL2Q8N4E4 241 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 FAM84AQ96KN4 292 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 USP36Q9P275 1121 aaKnown RBP16.29■□□□□ 0.2
U2AF1-211ENST00000486519 IL17BQ9UHF5 180 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 L1RE1Q9UN81 338 aa16.29■□□□□ 0.2
U2AF1-211ENST00000486519 METTL12A8MUP2 240 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 TRAK2O60296 914 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 ATP2C2O75185 946 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 GRIK1P39086 918 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 GRK6P43250 576 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 TSPY1Q01534 308 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 RHDQ02161 417 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 TMEM132DQ14C87 1099 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 PKDCCQ504Y2 493 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 RINT1Q6NUQ1 792 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 RUFY3Q7L099 469 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 TMEM25Q86YD3 366 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 FSIP1Q8NA03 581 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 DRC1Q96MC2 740 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 NTPCRQ9BSD7 190 aaKnown RBP16.28■□□□□ 0.2
U2AF1-211ENST00000486519 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.28■□□□□ 0.2
U2AF1-211ENST00000486519 CCSER1Q9C0I3 900 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 NRSN2Q9GZP1 204 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 MKRN2Q9H000 416 aaKnown RBP16.28■□□□□ 0.2
U2AF1-211ENST00000486519 ABCB6Q9NP58 842 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 FTSJ1Q9UET6 329 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 STARD13Q9Y3M8 1113 aa16.28■□□□□ 0.2
U2AF1-211ENST00000486519 ZNF840PA6NDX5 716 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 HOXC11O43248 304 aaPredicted RBP16.27■□□□□ 0.2
U2AF1-211ENST00000486519 OAS1P00973 400 aaKnown RBP16.27■□□□□ 0.2
U2AF1-211ENST00000486519 NFE2Q16621 373 aaPredicted RBP16.27■□□□□ 0.2
U2AF1-211ENST00000486519 TBC1D25Q3MII6 688 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 FUT11Q495W5 492 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 SLC39A4Q6P5W5 647 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 CACUL1Q86Y37 369 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 GATAD2AQ86YP4 633 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 ERMNQ8TAM6 284 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 KCNV2Q8TDN2 545 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 DDX43Q9NXZ2 648 aaKnown RBP16.27■□□□□ 0.2
U2AF1-211ENST00000486519 DEC1Q9P2X7 70 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 NXF1Q9UBU9 619 aaKnown RBP16.27■□□□□ 0.2
U2AF1-211ENST00000486519 CPSF3Q9UKF6 684 aaKnown RBP16.27■□□□□ 0.2
U2AF1-211ENST00000486519 NFE2L3Q9Y4A8 694 aa16.27■□□□□ 0.2
U2AF1-211ENST00000486519 CKAP5Q14008 2032 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 PP2D1A8MPX8 630 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 KPNA7A9QM74 516 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 SLC9A3R1O14745 358 aaPredicted RBP16.26■□□□□ 0.19
U2AF1-211ENST00000486519 OGTO15294 1046 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 ADSSP30520 456 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 NFKB2Q00653 900 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 GAD2Q05329 585 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 SUZ12Q15022 739 aaKnown RBP16.26■□□□□ 0.19
U2AF1-211ENST00000486519 FBXL19Q6PCT2 694 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
U2AF1-211ENST00000486519 BBS7Q8IWZ6 715 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 P2RY11Q96G91 374 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 LGMNQ99538 433 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 DPP3Q9NY33 737 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 ORC3Q9UBD5 711 aaPredicted RBP16.26■□□□□ 0.19
U2AF1-211ENST00000486519 ANKRD6Q9Y2G4 727 aa16.26■□□□□ 0.19
U2AF1-211ENST00000486519 BOD1L1Q8NFC6 3051 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 TISP43B9A030 160 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 ENC1O14682 589 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms