RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 AP1G2O75843 785 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 IFNB1P01574 187 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 KRT7P08729 469 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 SETSIPP0DME0 302 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 NPR3P17342 541 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 HSPA9P38646 679 aaKnown RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 OTUD4Q01804 1114 aaKnown RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 ADCY1Q08828 1119 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 IFRD2Q12894 506 aaPredicted RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 TUSC3Q13454 348 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 MTM1Q13496 603 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 CLUL1Q15846 466 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 PPP2R5EQ16537 467 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 HSP90B2PQ58FF3 399 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 DNAJC21Q5F1R6 531 aaKnown RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 PPP6R3Q5H9R7 873 aaPredicted RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 FAM35AQ86V20 835 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 LRRTM3Q86VH5 581 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 RFX6Q8HWS3 928 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 FAM126BQ8IXS8 530 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 SH2D3CQ8N5H7 860 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 CCDC185Q8N715 623 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 ACTL9Q8TC94 416 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 PGBD4Q96DM1 585 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 TBCBQ99426 244 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 HNRNPABQ99729 332 aaKnown RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 TSEN34Q9BSV6 310 aaKnown RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 TMEM121Q9BTD3 319 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 CENPHQ9H3R5 247 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 VIPAS39Q9H9C1 493 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 RGS18Q9NS28 235 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 PHF24Q9UPV7 400 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 ZNF148Q9UQR1 794 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 TSC2P49815 1807 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 HSF2BPO75031 334 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 TJP3O95049 919 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 GNRH1P01148 92 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 FAM200BP0CF97 657 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 BDNFP23560 247 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 CHKAP35790 457 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 OR1G1P47890 313 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 AARSP49588 968 aaKnown RBP eCLIP6.52□□□□□ -1.37
CLK1-210ENST00000473565 TKTL1P51854 596 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 GDF10P55107 478 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 GRIK3Q13003 919 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 CCNG2Q16589 344 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 SYPL2Q5VXT5 272 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 FAM131BQ86XD5 332 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 IQCKQ8N0W5 287 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 DEFB106AQ8N104 65 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 PYROXD2Q8N2H3 581 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 RSPH1Q8WYR4 309 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 TSPAN18Q96SJ8 248 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 SNRNP25Q9BV90 132 aaKnown RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 TRAIPQ9BWF2 469 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 ULBP1Q9BZM6 244 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 FAM124BQ9H5Z6 455 aaPredicted RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 DDX56Q9NY93 547 aaKnown RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 YJEFN3A6XGL0 299 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 E7ENQ6 273 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 XPO1O14980 1071 aaKnown RBP6.51□□□□□ -1.37
CLK1-210ENST00000473565 RPLP2P05387 115 aaKnown RBP6.51□□□□□ -1.37
CLK1-210ENST00000473565 USP17L7P0C7H9 530 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 ODC1P11926 461 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 CCL5P13501 91 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 SELPP16109 830 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 IVDP26440 423 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 RPL9P32969 192 aaKnown RBP6.51□□□□□ -1.37
CLK1-210ENST00000473565 ADCY8P40145 1251 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 CETN2P41208 172 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 ITGA8P53708 1063 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 RNASELQ05823 741 aaKnown RBP6.51□□□□□ -1.37
CLK1-210ENST00000473565 NNTQ13423 1086 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 BYSLQ13895 437 aaKnown RBP6.51□□□□□ -1.37
CLK1-210ENST00000473565 DPYSL3Q14195 570 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 DCAF6Q58WW2 860 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 TTMPQ5BVD1 217 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 SYCP2LQ5T4T6 812 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 C1orf228Q6PIY5 440 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 GLB1LQ6UWU2 654 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 SLC24A5Q71RS6 500 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 POLNQ7Z5Q5 900 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 DEFB128Q7Z7B8 93 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 ZC3H18Q86VM9 953 aaKnown RBP6.51□□□□□ -1.37
CLK1-210ENST00000473565 CMASQ8NFW8 434 aaPredicted RBP6.51□□□□□ -1.37
CLK1-210ENST00000473565 ATL2Q8NHH9 583 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 STK32AQ8WU08 396 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 ACBD3Q9H3P7 528 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 LRRC4Q9HBW1 653 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 TBC1D13Q9NVG8 400 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 NEU2Q9Y3R4 380 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 MFHAS1Q9Y4C4 1052 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 MRPL42Q9Y6G3 142 aaKnown RBP6.51□□□□□ -1.37
CLK1-210ENST00000473565 SMIM23A6NLE4 172 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 NT5C1B-RDH14C9J2C7 533 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 AMHP03971 560 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 SHBGP04278 402 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 ATF2P15336 505 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 IL4RP24394 825 aa6.51□□□□□ -1.37
CLK1-210ENST00000473565 LHX1P48742 406 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms