RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ITGA9Q13797 1035 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 SMTNL2Q2TAL5 461 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 MYLK3Q32MK0 819 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 CRLF3Q8IUI8 442 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 NUDCD3Q8IVD9 361 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 PPM1NQ8N819 430 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 ACTL9Q8TC94 416 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 C7orf26Q96N11 449 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 SENP7Q9BQF6 1050 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 ZNF232Q9UNY5 417 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 SLX4Q8IY92 1834 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 AVILO75366 819 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 NOMO3P69849 1222 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 COG7P83436 770 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 ZNF252P-AS1Q0IIN9 211 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 MAP3K21Q5TCX8 1036 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 IYDQ6PHW0 289 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 FEZF2Q8TBJ5 459 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 SLC44A1Q8WWI5 657 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 HSPBAP1Q96EW2 488 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 MCEEQ96PE7 176 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 MMP19Q99542 508 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 EPB41L1Q9H4G0 881 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 GPBP1L1Q9HC44 474 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-207ENST00000470763 HBS1LQ9Y450 684 aaKnown RBP14.31□□□□□ -0.12
NPHP4-207ENST00000470763 IPO5O00410 1097 aaKnown RBP14.31□□□□□ -0.12
NPHP4-207ENST00000470763 PMM2O15305 246 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 SUPT3HO75486 399 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 NDUFB10O96000 172 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 CYLC2Q14093 348 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-207ENST00000470763 CEP55Q53EZ4 464 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 TFDP3Q5H9I0 405 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 SH3D19Q5HYK7 790 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 SIAH1Q8IUQ4 282 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 PIP4K2CQ8TBX8 421 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 GAB3Q8WWW8 586 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 NKD2Q969F2 451 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-207ENST00000470763 CFAP36Q96G28 342 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 CNBD2Q96M20 576 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 DTNAQ9Y4J8 743 aa14.31□□□□□ -0.12
NPHP4-207ENST00000470763 HEMK1Q9Y5R4 338 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-207ENST00000470763 KLF11O14901 512 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 ZMPSTE24O75844 475 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 SERPINA6P08185 405 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 FDFT1P37268 417 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 C1QTNF8P60827 252 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 MRPS5P82675 430 aaKnown RBP14.3□□□□□ -0.12
NPHP4-207ENST00000470763 GTF2BQ00403 316 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 ATG16L1Q676U5 607 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 PLEKHA7Q6IQ23 1121 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 TMEM270Q6UE05 265 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 RSAD2Q8WXG1 361 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 TEKT3Q9BXF9 490 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 C1orf21Q9H246 121 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 ARHGEF38Q9NXL2 777 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 GGA1Q9UJY5 639 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 AGTPBP1Q9UPW5 1226 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 LOC100653049A0A140TA62 436 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 NFKBIEO00221 500 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 RIMBP2O15034 1052 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 KRT34O76011 436 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 IL1BP01584 269 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 WEE2P0C1S8 567 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 GCNT1Q02742 428 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 TEX44Q53QW1 395 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 TRIM67Q6ZTA4 783 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 PCGF5Q86SE9 256 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 UNC45BQ8IWX7 931 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 PRPF18Q99633 342 aaKnown RBP14.3□□□□□ -0.12
NPHP4-207ENST00000470763 CDH22Q9UJ99 828 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 SERPINA10Q9UK55 444 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 LYPLA1O75608 230 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-207ENST00000470763 CDKN2BP42772 138 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 RARRES1P49788 294 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 EMP3P54852 163 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 OGDHQ02218 1023 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 PLOD1Q02809 727 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-207ENST00000470763 SFSWAPQ12872 951 aaKnown RBP14.3□□□□□ -0.12
NPHP4-207ENST00000470763 KCNT1Q5JUK3 1230 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 FAM102BQ5T8I3 360 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 FAM71DQ8N9W8 422 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 SLC35B2Q8TB61 432 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 MRPL1Q9BYD6 325 aaKnown RBP14.3□□□□□ -0.12
NPHP4-207ENST00000470763 WDR11Q9BZH6 1224 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 IP6K2Q9UHH9 426 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 POMPQ9Y244 141 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 PLLPQ9Y342 182 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 PPME1Q9Y570 386 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 SCINQ9Y6U3 715 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 ZHX2Q9Y6X8 837 aa14.3□□□□□ -0.12
NPHP4-207ENST00000470763 E7ESA3 106 aa14.29□□□□□ -0.12
NPHP4-207ENST00000470763 GNA15P30679 374 aa14.29□□□□□ -0.12
NPHP4-207ENST00000470763 CBX3Q13185 183 aa14.29□□□□□ -0.12
NPHP4-207ENST00000470763 STYK1Q6J9G0 422 aa14.29□□□□□ -0.12
NPHP4-207ENST00000470763 MIER3Q7Z3K6 550 aa14.29□□□□□ -0.12
NPHP4-207ENST00000470763 RSPH3Q86UC2 560 aa14.29□□□□□ -0.12
NPHP4-207ENST00000470763 DEFB107AQ8IZN7 70 aa14.29□□□□□ -0.12
NPHP4-207ENST00000470763 LZICQ8WZA0 190 aa14.29□□□□□ -0.12
NPHP4-207ENST00000470763 MASTLQ96GX5 879 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms