RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TFRCP02786 760 aaKnown RBP8.69□□□□□ -1.02
VPS36-201ENST00000378060 ARP10275 920 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 RARAP10276 462 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 PCSK1P29120 753 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 HADHAP40939 763 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 PCNX4Q63HM2 1172 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 FOXR1Q6PIV2 292 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 SH3BP5LQ7L8J4 393 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 SLC47A2Q86VL8 602 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 CLEC4FQ8N1N0 589 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 INPP5DQ92835 1189 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 SLC5A5Q92911 643 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 MAML3Q96JK9 1138 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 GCNAQ96QF7 691 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 ADNPQ9H2P0 1102 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 MMADHCQ9H3L0 296 aaPredicted RBP8.69□□□□□ -1.02
VPS36-201ENST00000378060 CATSPERBQ9H7T0 1116 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 LRRC40Q9H9A6 602 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 GPBP1L1Q9HC44 474 aaPredicted RBP8.69□□□□□ -1.02
VPS36-201ENST00000378060 RIC8BQ9NVN3 520 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 SLC39A10Q9ULF5 831 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 AP4S1Q9Y587 144 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 TNPO2O14787 897 aaKnown RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 ARHGEF9O43307 516 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 TBC1D4O60343 1298 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PYGMP11217 842 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 DDX5P17844 614 aaKnown RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 NUDT2P50583 147 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 RAD51Q06609 339 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 MTM1Q13496 603 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 SV2CQ496J9 727 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 C6orf10Q5SRN2 563 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 CDR2LQ86X02 465 aaPredicted RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 SHCBP1Q8NEM2 672 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PARD3BQ8TEW8 1205 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 FAM163AQ96GL9 167 aaPredicted RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 MTMR9Q96QG7 549 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 TMEM120AQ9BXJ8 343 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 ASCC2Q9H1I8 757 aaPredicted RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 CYP3A43Q9HB55 503 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 ERAP1Q9NZ08 941 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 HACD3Q9P035 362 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 HACL1Q9UJ83 578 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 SOX13Q9UN79 622 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 TMX2Q9Y320 296 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 DDX60LQ5H9U9 1706 aaKnown RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 SIPA1L1O43166 1804 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 SERPINB8P50452 374 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 AQP5P55064 265 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 IFI35P80217 286 aaPredicted RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 LBRQ14739 615 aaKnown RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 DCAF6Q58WW2 860 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 TTMPQ5BVD1 217 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 ANGEL2Q5VTE6 544 aaKnown RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 IFNEQ86WN2 208 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 URGCPQ8TCY9 931 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 SPIRE2Q8WWL2 714 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PPP1R36Q96LQ0 422 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 SIKE1Q9BRV8 207 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 TMEM121Q9BTD3 319 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 NMRK2Q9NPI5 230 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 OLA1Q9NTK5 396 aaKnown RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 SLC38A7Q9NVC3 462 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.68□□□□□ -1.02
VPS36-201ENST00000378060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.68□□□□□ -1.02
VPS36-201ENST00000378060 TJP2Q9UDY2 1190 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 BRCA2P51587 3418 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 NDUFS3O75489 264 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 TOMM70O94826 608 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 GH1P01241 217 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 TGM2P21980 687 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PBX1P40424 430 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 NUP107P57740 925 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PSMC6P62333 389 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 SLC34A1Q06495 639 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 ITGB3BPQ13352 177 aaPredicted RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 RBBP7Q16576 425 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 GOLGA7BQ2TAP0 167 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 ERMARDQ5T6L9 678 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 TTC23LQ6PF05 361 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 UBA3Q8TBC4 463 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 ASIC4Q96FT7 647 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 GPRC5CQ9NQ84 441 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PAPOLBQ9NRJ5 636 aaKnown RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 FAM49BQ9NUQ9 324 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 IRAK4Q9NWZ3 460 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 GGA3Q9NZ52 723 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PIN4Q9Y237 131 aaKnown RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 LAMB1P07942 1786 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 ZNF263O14978 683 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 KDM1AO60341 852 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 SNX3O60493 162 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 SUPT3HO75486 399 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 PDGFRBP09619 1106 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 RALBP11234 206 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 TRPC1P48995 793 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 AGAP9Q5VTM2 703 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 BNC2Q6ZN30 1099 aaPredicted RBP8.68□□□□□ -1.02
VPS36-201ENST00000378060 LRRC55Q6ZSA7 311 aa8.68□□□□□ -1.02
VPS36-201ENST00000378060 NIPA1Q7RTP0 329 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms