RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 KBTBD13C9JR72 458 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 E9PBE3 544 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 SPECC1L-ADORA2AF8WAN1 911 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 CSDE1O75534 798 aaKnown RBP12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ZMPSTE24O75844 475 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ATP6V1B1P15313 513 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ATF7P17544 494 aaPredicted RBP12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 PRELPP51888 382 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 DNAL1Q4LDG9 190 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 KRT39Q6A163 491 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ALDH16A1Q8IZ83 802 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 BBS5Q8N3I7 341 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 PHTF2Q8N3S3 785 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 LZTR1Q8N653 840 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 HIPK4Q8NE63 616 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ALKBH8Q96BT7 664 aaKnown RBP12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 BTBD9Q96Q07 612 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 RIMS3Q9UJD0 308 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 APPL1Q9UKG1 709 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF652Q9Y2D9 606 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 CENPFP49454 3210 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 KANSL1LA0AUZ9 987 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 CLPTM1O96005 669 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 OATP04181 439 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 IL1R2P27930 398 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 PTPN7P35236 360 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 XIAPP98170 497 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 TRIP10Q15642 601 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ZRSR2Q15696 482 aaKnown RBP12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 CHI3L2Q15782 390 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 SMYD1Q8NB12 490 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ATP11CQ8NB49 1132 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 TTC13Q8NBP0 860 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 CCDC124Q96CT7 223 aaKnown RBP12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 APOBEC3GQ9HC16 384 aaKnown RBP12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 TMEM8AQ9HCN3 771 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ARHGAP28Q9P2N2 729 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 TMEM191CA6NGB0 347 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 C6orf229H3BNL8 230 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 SUPT3HO75486 399 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 LDHCP07864 332 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 TMEM191BP0C7N4 346 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 RPL26P61254 145 aaKnown RBP12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 SLC10A2Q12908 348 aaPredicted RBP12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 PADI6Q6TGC4 694 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 ABTB1Q969K4 478 aaPredicted RBP12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 FBXL18Q96ME1 805 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 SORT1Q99523 831 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 PCDH18Q9HCL0 1135 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 TIMMDC1Q9NPL8 285 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 FAIMQ9NVQ4 179 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 RNF11Q9Y3C5 154 aa12.15□□□□□ -0.46
SMARCA1-201ENST00000371121 SIN3BO75182 1162 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 GMPRP36959 345 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 HIC1Q14526 733 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 ACAP1Q15027 740 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 VWA5B1Q5TIE3 1220 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 BORAQ6PGQ7 559 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 DHRS4L2Q6PKH6 230 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 PPIL6Q8IXY8 311 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 ARHGAP24Q8N264 748 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 MFSD14AQ96MC6 490 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 CSRNP1Q96S65 589 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 KCND2Q9NZV8 630 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 POLLQ9UGP5 575 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 DMTF1Q9Y222 760 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 SGK1O00141 431 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 TLR3O15455 904 aaKnown RBP12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 DHX15O43143 795 aaKnown RBP12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 IFNB1P01574 187 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 MT-ND3P03897 115 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 PDK1Q15118 436 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 C6orf52Q5T4I8 152 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 LRRC8BQ6P9F7 803 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 DNAJC14Q6Y2X3 702 aaPredicted RBP12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 KCTD17Q8N5Z5 321 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 FBXL13Q8NEE6 735 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 AK5Q9Y6K8 562 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 SIP14410 1827 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 ZBTB14O43829 449 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 TRMUO75648 421 aaKnown RBP12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 VNN1O95497 513 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 TFPTP0C1Z6 253 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 KRT5P13647 590 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 ALDH1A3P47895 512 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 EPHB1P54762 984 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 MTTPP55157 894 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 GCNT1Q02742 428 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 BMPR2Q13873 1038 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 MAP7Q14244 749 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 UGCGQ16739 394 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 TSHZ1Q6ZSZ6 1077 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
SMARCA1-201ENST00000371121 SLC16A4O15374 487 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 THRAP10827 490 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms