RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CIPCQ9C0C6 399 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 PRDM16Q9HAZ2 1276 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 MRPL40Q9NQ50 206 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ASAH2Q9NR71 780 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ZFATQ9P243 1243 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 RAD51CO43502 376 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ESRRAP11474 423 aaPredicted RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TYK2P29597 1187 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 FDFT1P37268 417 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 MAPK7Q13164 816 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 JADE1Q6IE81 842 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 KCNK18Q7Z418 384 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 C12orf56Q8IXR9 622 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ATPAF2Q8N5M1 289 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 CALML6Q8TD86 181 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TTC17Q96AE7 1141 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 LRGUKQ96M69 825 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TBCBQ99426 244 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 SLC7A5P2Q9GIP4 190 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 IL23AQ9NPF7 189 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TRIM33Q9UPN9 1127 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 APOBEC2Q9Y235 224 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 IGKV6D-41A0A0C4DH26 115 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 GOLGA8MH3BSY2 632 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 HARS2P49590 506 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 SH3BGRP55822 239 aaPredicted RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 MYL6P60660 151 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 SF3A3Q12874 501 aaKnown RBP eCLIP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 PDCLQ13371 301 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TIGD5Q53EQ6 642 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 SLC24A5Q71RS6 500 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 PPIL6Q8IXY8 311 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 PPHLN1Q8NEY8 458 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 CYFIP2Q96F07 1278 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 INPP4AQ96PE3 977 aaPredicted RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 HAUS8Q9BT25 410 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 VCX3AQ9NNX9 186 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 METTL5Q9NRN9 209 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 SMPD4Q9NXE4 827 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 HES2Q9Y543 173 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ARAP2Q8WZ64 1704 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 NRIP1P48552 1158 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 LIG3P49916 1009 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ZNF135P52742 658 aaPredicted RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 DMTNQ08495 405 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TFDP3Q5H9I0 405 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 MEI1Q5TIA1 1274 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 PRR23BQ6ZRT6 265 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ZNF662Q6ZS27 426 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ACAD11Q709F0 780 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 LINC00523Q86TU6 105 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 C4orf32Q8N8J7 132 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ATP6V0D2Q8N8Y2 350 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 UBA3Q8TBC4 463 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 CHMP6Q96FZ7 201 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ECM29Q5VYK3 1845 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 APRTP07741 180 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ILF2Q12905 390 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TRADDQ15628 312 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 SNCBQ16143 134 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 PSMD5Q16401 504 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 NFIL3Q16649 462 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 NAPEPLDQ6IQ20 393 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TRIM67Q6ZTA4 783 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 MIB1Q86YT6 1006 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ANKLE1Q8NAG6 615 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 SLC7A14Q8TBB6 771 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 RAPGEF5Q92565 580 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TSPAN17Q96FV3 270 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ELAC2Q9BQ52 826 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 LACRTQ9GZZ8 138 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 VPS11Q9H270 941 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 R3HDMLQ9H3Y0 253 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 PSMC3IPQ9P2W1 217 aaPredicted RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ZC3H7BQ9UGR2 993 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ZNF214Q9UL59 606 aaPredicted RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TNFSF13BQ9Y275 285 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 RRP15Q9Y3B9 282 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 CCL16O15467 120 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 MAFO75444 373 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 FGFR1P11362 822 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 GLUD2P49448 558 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 BST2Q10589 180 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 CCNG2Q16589 344 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 MUM1Q2TAK8 710 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 TMC5Q6UXY8 1006 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 ADGRF2Q8IZF7 708 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 SDCCAG3Q96C92 435 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 ALG13Q9NP73 1137 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 WHRNQ9P202 907 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 MYH14Q7Z406 1995 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 RNASEH1O60930 286 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 NDUFS2O75306 463 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 AP1G2O75843 785 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 NCAM1P13591 858 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 RFC2P35250 354 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 MARSP56192 900 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 TSHZ1Q6ZSZ6 1077 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms