RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ZFPM1Q8IX07 1006 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 TTLL6Q8N841 843 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 TMEM8AQ9HCN3 771 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 POLIQ9UNA4 740 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 CLPTM1O96005 669 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 TFAP2AP05549 437 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 RAG1P15918 1043 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 ADARP55265 1226 aaKnown RBP14.34□□□□□ -0.11
NPHP4-207ENST00000470763 GRAPQ13588 217 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 RABGAP1LQ5R372 815 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 CIAPIN1Q6FI81 312 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 SPOCD1Q6ZMY3 1216 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 MAP7D3Q8IWC1 876 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 PPIL6Q8IXY8 311 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 GRAPLQ8TC17 118 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-207ENST00000470763 TRIM11Q96F44 468 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 KCND2Q9NZV8 630 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 F8VP50 259 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 NFASCO94856 1347 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 CDK4P11802 303 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 PCSK6P29122 969 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 NFIAQ12857 509 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 PEX6Q13608 980 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 TLR1Q15399 786 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 TMEM259Q4ZIN3 620 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 SPOPLQ6IQ16 392 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 C1orf228Q6PIY5 440 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 KYAT3Q6YP21 454 aaKnown RBP14.34□□□□□ -0.11
NPHP4-207ENST00000470763 RCOR2Q8IZ40 523 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 E2F7Q96AV8 911 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 SNCAIPQ9Y6H5 919 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 SBF1O95248 1867 aa14.33□□□□□ -0.11
NPHP4-207ENST00000470763 TCRBV9S1A1TA0A576 114 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 CACNB3P54284 484 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 YWHAGP61981 247 aaKnown RBP eCLIP14.33□□□□□ -0.12
NPHP4-207ENST00000470763 BASP1P80723 227 aaKnown RBP14.33□□□□□ -0.12
NPHP4-207ENST00000470763 TBL3Q12788 808 aaKnown RBP14.33□□□□□ -0.12
NPHP4-207ENST00000470763 C1QTNF12Q5T7M4 302 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 KLC3Q6P597 504 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 AAGABQ6PD74 315 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 DENND5BQ6ZUT9 1274 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 TRIM42Q8IWZ5 723 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 CTAGE3PQ8IX95 158 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 ICA1LQ8NDH6 482 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 DCAF4Q8WV16 495 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 APPL1Q9UKG1 709 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 TRIM49D1C9J1S8 452 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 PMLP29590 882 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 GTF2H1P32780 548 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 ELK3P41970 407 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 IRX4P78413 519 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 TCP10Q12799 353 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 ADGRG6Q86SQ4 1221 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 CATSPER2Q96P56 530 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 FETUBQ9UGM5 382 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 XPO7Q9UIA9 1087 aaKnown RBP14.33□□□□□ -0.12
NPHP4-207ENST00000470763 COQ4Q9Y3A0 265 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 PCDHB2Q9Y5E7 798 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 FOCADQ5VW36 1801 aa14.33□□□□□ -0.12
NPHP4-207ENST00000470763 KBTBD13C9JR72 458 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 PROCP04070 461 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 RPL5P46777 297 aaKnown RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 SLC18A2Q05940 514 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 GK3PQ14409 553 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 DRICH1Q6PGQ1 229 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 SH2D5Q6ZV89 423 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 C12orf56Q8IXR9 622 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 PDIK1LQ8N165 341 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 NAT8LQ8N9F0 302 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 ZFP28Q8NHY6 868 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 MRPL47Q9HD33 250 aaKnown RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 C1orf112Q9NSG2 853 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 LZTS1Q9Y250 596 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 DRG1Q9Y295 367 aaKnown RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 INPP5FQ9Y2H2 1132 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 RBBP6Q7Z6E9 1792 aaKnown RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 hCG_1818297A0A087WSY0 165 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 KLRG2A4D1S0 409 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 GDF11O95390 407 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 HLA-DOAP06340 250 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 IL1R1P14778 569 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 BMPR2Q13873 1038 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 HPS6Q86YV9 775 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 KCTD17Q8N5Z5 321 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 PRPF31Q8WWY3 499 aaKnown RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 APOL6Q9BWW8 343 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 UBAP1Q9NZ09 502 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 NDUFA13Q9P0J0 144 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 CIDEBQ9UHD4 219 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 PACSIN3Q9UKS6 424 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 TDRKHQ9Y2W6 561 aaKnown RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 TOP3BO95985 862 aaKnown RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 ITGAVP06756 1048 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 PIM1P11309 404 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 RPL22P35268 128 aaKnown RBP14.32□□□□□ -0.12
NPHP4-207ENST00000470763 NCKAP1LP55160 1127 aa14.32□□□□□ -0.12
NPHP4-207ENST00000470763 OTUD4Q01804 1114 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms