RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 DECR2Q9NUI1 292 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 MARCH2Q9P0N8 246 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 FBLN5Q9UBX5 448 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 LPAR3Q9UBY5 353 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 PRSS50Q9UI38 385 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 SCOCQ9UIL1 159 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 SH3BGRL2Q9UJC5 107 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 SIT1Q9Y3P8 196 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 TIMM13Q9Y5L4 95 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-204ENST00000396464 PSAT1Q9Y617 370 aa5.4□□□□□ -1.54
GABPB1-204ENST00000396464 C7orf72A4D263 438 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 TMEM110-MUSTN1A8MSY1 372 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 PTGES3LE9PB15 166 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 DDX39AO00148 427 aaKnown RBP5.4□□□□□ -1.55
GABPB1-204ENST00000396464 FMO6PO60774 539 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 PRPF6O94906 941 aaKnown RBP5.4□□□□□ -1.55
GABPB1-204ENST00000396464 ANXA1P04083 346 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 TUBB4AP04350 444 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 PRKCBP05771 671 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 PFKMP08237 780 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 PCP11498 1178 aaKnown RBP5.4□□□□□ -1.55
GABPB1-204ENST00000396464 IFNAR1P17181 557 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 SDHAP31040 664 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 RGS2P41220 211 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 FLT3LGP49771 235 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 POLE2P56282 527 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 RPL11P62913 178 aaKnown RBP5.4□□□□□ -1.55
GABPB1-204ENST00000396464 HMGN5P82970 282 aaKnown RBP5.4□□□□□ -1.55
GABPB1-204ENST00000396464 ZXDAP98168 799 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 PPP3CAQ08209 521 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 MGAT2Q10469 447 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 GPR68Q15743 365 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 TBCCQ15814 346 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 BMP2KLQ5H9B9 411 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 KHDC1LQ5JSQ8 128 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 GLB1LQ6UWU2 654 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 UNQ6494/PRO21346Q6UXR6 183 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 USP49Q70CQ1 688 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 UNC13DQ70J99 1090 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 RNF44Q7L0R7 432 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 RRAGAQ7L523 313 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 DIS3L2Q8IYB7 885 aaKnown RBP5.4□□□□□ -1.55
GABPB1-204ENST00000396464 TMEM57Q8N5G2 664 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 TTLL6Q8N841 843 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 OR14C36Q8NHC7 312 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 TBC1D5Q92609 795 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 CUL5Q93034 780 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 C8orf49Q96NF6 230 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 MOGAT1Q96PD6 335 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 VRK1Q99986 396 aaPredicted RBP5.4□□□□□ -1.55
GABPB1-204ENST00000396464 C11orf84Q9BUA3 381 aaPredicted RBP5.4□□□□□ -1.55
GABPB1-204ENST00000396464 MAGEB5Q9BZ81 275 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 TRIM5Q9C035 493 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 NDST4Q9H3R1 872 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 ERVMER34-1Q9H9K5 563 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 RXFP3Q9NSD7 469 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 TBCCD1Q9NVR7 557 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 PI4KBQ9UBF8 816 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 MOSPD1Q9UJG1 213 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 FBXL5Q9UKA1 691 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 SMC3Q9UQE7 1217 aa5.4□□□□□ -1.55
GABPB1-204ENST00000396464 MTO1Q9Y2Z2 717 aaKnown RBP5.4□□□□□ -1.55
GABPB1-204ENST00000396464 A0A087WZ62 844 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 UBA6A0AVT1 1052 aaPredicted RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 NDC80O14777 642 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 SGTAO43765 313 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 PPP1R11O60927 126 aaPredicted RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 TBX10O75333 385 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 C8BP07358 591 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 CNPP09543 421 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 HSPA1AP0DMV8 641 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 HSPA1BP0DMV9 641 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 C6P13671 934 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 IL1R1P14778 569 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 GSPT1P15170 499 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 NPPBP16860 134 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 RPL13P26373 211 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 TM4SF1P30408 202 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 TLX1P31314 330 aaPredicted RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 THPOP40225 353 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 EIF2DP41214 584 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 CARSP49589 748 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 ARFIP2P53365 341 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 PPARAQ07869 468 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 C17orf67Q0P5P2 114 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 AIMP1Q12904 312 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 SF3B3Q15393 1217 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 BAK1Q16611 211 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 KHDC1Q4VXA5 237 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 PRAMEF14Q5SWL7 426 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 ATPAF1Q5TC12 328 aaPredicted RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 ARL6IP4Q66PJ3 421 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 MFSD5Q6N075 450 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 IYDQ6PHW0 289 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 CRTC1Q6UUV9 634 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 PIWIL3Q7Z3Z3 882 aaKnown RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 RHOT1Q8IXI2 618 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 TBC1D21Q8IYX1 336 aa5.39□□□□□ -1.55
GABPB1-204ENST00000396464 C17orf53Q8N3J3 647 aaPredicted RBP5.39□□□□□ -1.55
GABPB1-204ENST00000396464 GALNT4Q8N4A0 578 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms