RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 IL10RAQ13651 578 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 KIF22Q14807 665 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 NFATC4Q14934 902 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 INPP5JQ15735 1006 aaPredicted RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 CLUL1Q15846 466 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 AMOTQ4VCS5 1084 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 RNASE12Q5GAN4 147 aaKnown RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 TMEM63BQ5T3F8 832 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 ARHGAP40Q5TG30 622 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 FAM160B1Q5W0V3 765 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 ZNF324BQ6AW86 544 aaPredicted RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 PPP1R32Q7Z5V6 425 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 BCDIN3DQ7Z5W3 292 aaKnown RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 STRA8Q7Z7C7 330 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 TTC7BQ86TV6 843 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 CUZD1Q86UP6 607 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 AMOTL1Q8IY63 956 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 C16orf71Q8IYS4 520 aaPredicted RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 IQCF1Q8N6M8 205 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 SIRT6Q8N6T7 355 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 FAM46DQ8NEK8 389 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 WFIKKN2Q8TEU8 576 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 PNISRQ8TF01 805 aaKnown RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 NUDCD2Q8WVJ2 157 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 ATG4AQ8WYN0 398 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 R3HDM4Q96D70 268 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 ZNF479Q96JC4 524 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 PTDSS2Q9BVG9 487 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 TTYH3Q9C0H2 523 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 SLAMF7Q9NQ25 335 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 ZNF277Q9NRM2 450 aaPredicted RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 GABRQQ9UN88 632 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 SSX2IPQ9Y2D8 614 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 TRIOBPQ9H2D6 2365 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 A0A1B0GVY2 172 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 NT5C1B-RDH14C9J2C7 533 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 M0QYG6 137 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 GRID2O43424 1007 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 HTRA2O43464 458 aaPredicted RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 NDUFS2O75306 463 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 CDC45O75419 566 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 EYA4O95677 639 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 SYF2O95926 243 aaKnown RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 CGAP01215 116 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 FGAP02671 866 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 ATXN1LP0C7T5 689 aaKnown RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 FGF3P11487 239 aaPredicted RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 PHKG2P15735 406 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 PPIFP30405 207 aaKnown RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 IL6STP40189 918 aaPredicted RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 PHKA1P46020 1223 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 KCNJ4P48050 445 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 PIK3CGP48736 1102 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 LOXL3P58215 753 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 RPL36AP83881 106 aaKnown RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 MTX1Q13505 466 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 BOP1Q14137 746 aaKnown RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 IQCB1Q15051 598 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 ZNF750Q32MQ0 723 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 CCDC144BQ3MJ40 725 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 LONRF3Q496Y0 759 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 SLC9C1Q4G0N8 1177 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 OTUD3Q5T2D3 398 aaPredicted RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 TMTC4Q5T4D3 741 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 TMEM65Q6PI78 240 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 RANBP10Q6VN20 620 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 UBE2Q1Q7Z7E8 422 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 SOCS4Q8WXH5 440 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 TNPO1Q92973 898 aaKnown RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 SLC25A28Q96A46 364 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 NLRP4Q96MN2 994 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 SLC46A1Q96NT5 459 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 C1orf43Q9BWL3 253 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 MRPL44Q9H9J2 332 aaKnown RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 TMEM8AQ9HCN3 771 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 SEMA4BQ9NPR2 832 aaPredicted RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 ASIC5Q9NY37 505 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 AMFRQ9UKV5 643 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 NDRG4Q9ULP0 352 aaKnown RBP1.14□□□□□ -2.23
COPB1-212ENST00000534771 MAFFQ9ULX9 164 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 LIMCH1Q9UPQ0 1083 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 IPPQ9Y573 584 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 TTC3P53804 2025 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 WASHC2AQ641Q2 1341 aa1.14□□□□□ -2.23
COPB1-212ENST00000534771 CCDC154A6NI56 674 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 TRIM75PA6NK02 468 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 PSMD9O00233 223 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 FOXN3O00409 490 aaPredicted RBP1.13□□□□□ -2.23
COPB1-212ENST00000534771 CES2O00748 559 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 TNFRSF13BO14836 293 aaPredicted RBP1.13□□□□□ -2.23
COPB1-212ENST00000534771 DCLK1O15075 740 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 ERC2O15083 957 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 LINC01565O15544 149 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 SOCS5O75159 536 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 PRKD3O94806 890 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 ARIH2O95376 493 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 CD63P08962 238 aa1.13□□□□□ -2.23
COPB1-212ENST00000534771 FGF2P09038 288 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms