RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZNF461Q8TAF7 563 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 SLC7A14Q8TBB6 771 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 NOX5Q96PH1 765 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 STRA6Q9BX79 667 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 TBC1D7Q9P0N9 293 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 EPS15L1Q9UBC2 864 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 POLIQ9UNA4 740 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 MAPK8IP1Q9UQF2 711 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 GRID2IPA4D2P6 1211 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 PRR23AA6NEV1 266 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ANKRD63C9JTQ0 380 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 M0QZQ0 153 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 EIF3DO15371 548 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL5A1-202ENST00000371820 MEFVO15553 781 aaPredicted RBP11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ADAM12O43184 909 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 NARSO43776 548 aaKnown RBP11.06□□□□□ -0.64
COL5A1-202ENST00000371820 SERPING1P05155 500 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 RHOXF2BP0C7M4 288 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ODC1P11926 461 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 CPB1P15086 417 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ATF2P15336 505 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 FSHRP23945 695 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 TNFRSF8P28908 595 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ACOT2P49753 483 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ROR1Q01973 937 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 MRPL58Q14197 206 aaKnown RBP11.06□□□□□ -0.64
COL5A1-202ENST00000371820 EDRF1Q3B7T1 1238 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 CFAP221Q4G0U5 840 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ZBTB41Q5SVQ8 909 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 EMBQ6PCB8 327 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ASCL5Q7RTU5 278 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 CCDC105Q8IYK2 499 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 SIX5Q8N196 739 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ELMOD1Q8N336 334 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 COG1Q8WTW3 980 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 ZNF560Q96MR9 790 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 MYADMQ96S97 322 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 RHOXF2Q9BQY4 288 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 MMRN2Q9H8L6 949 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 METTL14Q9HCE5 456 aaKnown RBP11.06□□□□□ -0.64
COL5A1-202ENST00000371820 CEP72Q9P209 647 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 FBXL5Q9UKA1 691 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 FBXL21Q9UKT6 434 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 DSEQ9UL01 958 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 SNX12Q9UMY4 172 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 UBE4BO95155 1302 aa11.06□□□□□ -0.64
COL5A1-202ENST00000371820 OR6C75A6NL08 312 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 GOLGA8KD6RF30 607 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 CETN3O15182 167 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 CCL16O15467 120 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 PI15O43692 258 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 EXTL3O43909 919 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 TBC1D4O60343 1298 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 GFPT2O94808 682 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 ABLIM3O94929 683 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 NFICP08651 508 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 TYMPP19971 482 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 RPL13P26373 211 aaKnown RBP11.05□□□□□ -0.64
COL5A1-202ENST00000371820 PNPLA4P41247 253 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 HNRNPH2P55795 449 aaKnown RBP11.05□□□□□ -0.64
COL5A1-202ENST00000371820 ARPP19P56211 112 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 PLD1Q13393 1074 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 SURF1Q15526 300 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 ZSCAN26Q16670 478 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 MIIPQ5JXC2 388 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 RIF1Q5UIP0 2472 aaKnown RBP11.05□□□□□ -0.64
COL5A1-202ENST00000371820 SFMBT2Q5VUG0 894 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 GRASPQ7Z6J2 395 aaPredicted RBP11.05□□□□□ -0.64
COL5A1-202ENST00000371820 BRSK2Q8IWQ3 736 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 IFT20Q8IY31 132 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 TCEAL8Q8IYN2 117 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 RSAD2Q8WXG1 361 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 RTP3Q9BQQ7 232 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 CYP4F11Q9HBI6 524 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 PDE11AQ9HCR9 933 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 WNT16Q9UBV4 365 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 AFF4Q9UHB7 1163 aaKnown RBP11.05□□□□□ -0.64
COL5A1-202ENST00000371820 SIK3Q9Y2K2 1263 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 REXO2Q9Y3B8 237 aaKnown RBP11.05□□□□□ -0.64
COL5A1-202ENST00000371820 FAM186AA6NE01 2351 aa11.05□□□□□ -0.64
COL5A1-202ENST00000371820 WDR27A2RRH5 827 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 KRBA1A5PL33 1030 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 TISP43B9A030 160 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 RNF225M0QZC1 329 aaPredicted RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 PRPF6O94906 941 aaKnown RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 OAZ2O95190 189 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 CFHP08603 1231 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 CCDC172P0C7W6 258 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 SRFP11831 508 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 LAMP2P13473 410 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 IGFBP6P24592 240 aaPredicted RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 TAF6P49848 677 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 KIF11P52732 1056 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 PMS1P54277 932 aaKnown RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 LILRA4P59901 499 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 SNRPFP62306 86 aaKnown RBP11.04□□□□□ -0.64
COL5A1-202ENST00000371820 VSNL1P62760 191 aa11.04□□□□□ -0.64
COL5A1-202ENST00000371820 EHHADHQ08426 723 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms