RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 SLC26A4O43511 780 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 UNC5CO95185 931 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 NUDT17P0C025 328 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 CREB1P16220 341 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 RPA3P35244 121 aaPredicted RBP17.11■□□□□ 0.33
SFXN1-201ENST00000321442 MMP13P45452 471 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 XRCC4Q13426 336 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 ATP13A4Q4VNC1 1196 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 MOXD1Q6UVY6 613 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 SCUBE1Q8IWY4 988 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 UBA3Q8TBC4 463 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 SDCCAG3Q96C92 435 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 MRPL4Q9BYD3 311 aaKnown RBP17.11■□□□□ 0.33
SFXN1-201ENST00000321442 RHBDL2Q9NX52 303 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 ASTN1O14525 1302 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 ARHGAP10A1A4S6 786 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 ETS1P14921 441 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 CUL2Q13617 745 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 ZNF75CPQ92670 426 aaPredicted RBP17.11■□□□□ 0.33
SFXN1-201ENST00000321442 WARS2Q9UGM6 360 aaKnown RBP17.11■□□□□ 0.33
SFXN1-201ENST00000321442 MID2Q9UJV3 735 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 TCRBV7S2A1N4TA0A589 114 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 APOL1O14791 398 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 ONECUT3O60422 494 aaPredicted RBP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 ARSHQ5FYA8 562 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 XKR3Q5GH77 459 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 ERO1BQ86YB8 467 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 MCOLN2Q8IZK6 566 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 NMD3Q96D46 503 aaKnown RBP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 FASTKD1Q53R41 847 aaKnown RBP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 RWDD4Q6NW29 188 aaKnown RBP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 BZW1Q7L1Q6 419 aaKnown RBP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 OTOP1Q7RTM1 612 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 KDELC2Q7Z4H8 507 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 POU5F2Q8N7G0 328 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 SCG3Q8WXD2 468 aaKnown RBP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 CDCA5Q96FF9 252 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 RIPK3Q9Y572 518 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 SRRM3A6NNA2 597 aaPredicted RBP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 GNGT2O14610 69 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 JAG1P78504 1218 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 KPNB1Q14974 876 aaKnown RBP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 MTFR1Q15390 333 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 EME1Q96AY2 570 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 NACA2Q9H009 215 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 A1CFQ9NQ94 594 aaKnown RBP17.1■□□□□ 0.33
SFXN1-201ENST00000321442 ADORA2BP29275 332 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 TAP1Q03518 808 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 EMC2Q15006 297 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 TFDP3Q5H9I0 405 aa17.1■□□□□ 0.33
SFXN1-201ENST00000321442 FCHO1O14526 889 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 NME3Q13232 169 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 CRELD2Q6UXH1 353 aaPredicted RBP17.09■□□□□ 0.33
SFXN1-201ENST00000321442 PARP4Q9UKK3 1724 aaKnown RBP17.09■□□□□ 0.33
SFXN1-201ENST00000321442 GOLGA8QA0A0J9YX86 632 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 GOLGA8OA6NCC3 632 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 GOLGA8NF8WBI6 632 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 XPO1O14980 1071 aaKnown RBP17.09■□□□□ 0.33
SFXN1-201ENST00000321442 MCF2P10911 925 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 DSG1Q02413 1049 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 LLGL2Q6P1M3 1020 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 IYDQ6PHW0 289 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 FAM96AQ9H5X1 160 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 PSTPIP1O43586 416 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 AP1G2O75843 785 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 CLEC16AQ2KHT3 1053 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 GPC2Q8N158 579 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 GPRC5AQ8NFJ5 357 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 OR6J1Q8NGC5 347 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 RMDN2Q96LZ7 410 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 PXMP2Q9NR77 195 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 MCM8Q9UJA3 840 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 AURKCQ9UQB9 309 aa17.09■□□□□ 0.33
SFXN1-201ENST00000321442 RBAK-RBAKDNI3L0D1 243 aa17.08■□□□□ 0.33
SFXN1-201ENST00000321442 RARRES1P49788 294 aa17.08■□□□□ 0.33
SFXN1-201ENST00000321442 EXD1Q8NHP7 514 aa17.08■□□□□ 0.33
SFXN1-201ENST00000321442 DDX50Q9BQ39 737 aaKnown RBP17.08■□□□□ 0.33
SFXN1-201ENST00000321442 SPATC1LQ9H0A9 340 aa17.08■□□□□ 0.33
SFXN1-201ENST00000321442 PPCSQ9HAB8 311 aa17.08■□□□□ 0.33
SFXN1-201ENST00000321442 TTC36A6NLP5 189 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 SNUPNO95149 360 aaKnown RBP17.08■□□□□ 0.32
SFXN1-201ENST00000321442 PTDSS1P48651 473 aaKnown RBP17.08■□□□□ 0.32
SFXN1-201ENST00000321442 ATP6V1E2Q96A05 226 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 SHISA4Q96DD7 197 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 FAM49BQ9NUQ9 324 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 PDP2Q9P2J9 529 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 PCYOX1Q9UHG3 505 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 AGAP1Q9UPQ3 857 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 LRCH1Q9Y2L9 728 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 NFKBIEO00221 500 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 TGFB1I1O43294 461 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 LCA5LO95447 670 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 FDX1P10109 184 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 HSPA8P11142 646 aaKnown RBP17.08■□□□□ 0.32
SFXN1-201ENST00000321442 COPAP53621 1224 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 Q4G0T1 1027 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 LAYNQ6UX15 382 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms