RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 PWWP2AQ96N64 755 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 DNAJC16Q9Y2G8 782 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 CYP1A2P05177 515 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 NUDT2P50583 147 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 KCNT1Q5JUK3 1230 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 TRABD2AQ86V40 505 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 PSPC1Q8WXF1 523 aaKnown RBP15.26■□□□□ 0.03
VPS36-207ENST00000611132 MRPL1Q9BYD6 325 aaKnown RBP15.26■□□□□ 0.03
VPS36-207ENST00000611132 NMRK1Q9NWW6 199 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 AKT3Q9Y243 479 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 GSTA3Q16772 222 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 HYIQ5T013 277 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 FAXCQ5TGI0 409 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 MFSD7Q6UXD7 560 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 CAAP1Q9H8G2 361 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 C17orf75Q9HAS0 396 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 ACP6Q9NPH0 428 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 INPP5FQ9Y2H2 1132 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 ORC6Q9Y5N6 252 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 DPPA5A6NC42 116 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 XKR3Q5GH77 459 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 IYDQ6PHW0 289 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 OR6B3Q8NGW1 331 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 PGBD4Q96DM1 585 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 MPP4Q96JB8 637 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 NIF3L1Q9GZT8 377 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 C20orf96Q9NUD7 363 aaPredicted RBP15.25■□□□□ 0.03
VPS36-207ENST00000611132 MRC1P22897 1456 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 ADGRA3Q8IWK6 1321 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 SEC24DO94855 1032 aaPredicted RBP15.25■□□□□ 0.03
VPS36-207ENST00000611132 TMCC1O94876 653 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 TCN1P20061 433 aaPredicted RBP15.25■□□□□ 0.03
VPS36-207ENST00000611132 BMT2Q1RMZ1 405 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 PID1Q7Z2X4 250 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 NCAPG2Q86XI2 1143 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 RNF169Q8NCN4 708 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 TMEM143Q96AN5 459 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 PIK3C2AO00443 1686 aa15.25■□□□□ 0.03
VPS36-207ENST00000611132 UBAP1LF5GYI3 381 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 GLRA3O75311 464 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 FAM200BP0CF97 657 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 IL10P22301 178 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 NLRP11P59045 1033 aaKnown RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 CCDC92Q53HC0 331 aaPredicted RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 C1orf186Q6ZWK4 172 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 OTOP1Q7RTM1 612 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 ABRAQ8N0Z2 381 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 EBF2Q9HAK2 575 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 ARHGEF3Q9NR81 526 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 TMEM59LQ9UK28 342 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 AGAP1Q9UPQ3 857 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 ROBO3Q96MS0 1386 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 MYH8P13535 1937 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 ZBBXA8MT70 800 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 RAD17O75943 681 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 PDE5AO76074 875 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 ZSCAN5DPP0CG00 497 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 MAPTP10636 758 aaKnown RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 ELK3P41970 407 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 NPTX2P47972 431 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 IL1RL1Q01638 556 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 GCNT1Q02742 428 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 CYP24A1Q07973 514 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 ARSHQ5FYA8 562 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 OTOAQ7RTW8 1153 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 KATNAL2Q8IYT4 538 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 MAML3Q96JK9 1138 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 SRPK1Q96SB4 655 aaKnown RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 DGKIO75912 1065 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 POU5F1BQ06416 359 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 PRR5LQ6MZQ0 368 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 SIX6OS1Q8N1H7 587 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 GDPD5Q8WTR4 605 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 VCPIP1Q96JH7 1222 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 ZNF317Q96PQ6 595 aaPredicted RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 JPH1Q9HDC5 661 aaPredicted RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 AURKCQ9UQB9 309 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 SPRP35270 261 aaPredicted RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 GABPAQ06546 454 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 FASTKD1Q53R41 847 aaKnown RBP15.24■□□□□ 0.03
VPS36-207ENST00000611132 C4orf22Q6V702 233 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 FAM71AQ8IYT1 594 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 VPS33BQ9H267 617 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 SPEF2Q9C093 1822 aa15.24■□□□□ 0.03
VPS36-207ENST00000611132 ZBTB39O15060 712 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 XPOTO43592 962 aaKnown RBP15.23■□□□□ 0.03
VPS36-207ENST00000611132 GARTP22102 1010 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 DLG4P78352 724 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 ACVR2BQ13705 512 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 EEPD1Q7L9B9 569 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 DEFB107AQ8IZN7 70 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 CATSPER2Q96P56 530 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 DMAP1Q9NPF5 467 aaPredicted RBP15.23■□□□□ 0.03
VPS36-207ENST00000611132 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.23■□□□□ 0.03
VPS36-207ENST00000611132 KCNK4Q9NYG8 393 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 FMN2Q9NZ56 1722 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 RPTORQ8N122 1335 aa15.23■□□□□ 0.03
VPS36-207ENST00000611132 TGFB1I1O43294 461 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms