RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 KYAT1Q16773 422 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 UGT3A1Q6NUS8 523 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 GRAPLQ8TC17 118 aaPredicted RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 SPATA18Q8TC71 538 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 GPRASP2Q96D09 838 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 NSL1Q96IY1 281 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 GRID1Q9ULK0 1009 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 PFASO15067 1338 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 ZNF335Q9H4Z2 1342 aaPredicted RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 SNRPAP09012 282 aaKnown RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 STAT5BP51692 787 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 NPEPPSP55786 919 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 CCDC144BQ3MJ40 725 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 EFL1Q7Z2Z2 1120 aaKnown RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 KRT35Q92764 455 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 LRRC39Q96DD0 335 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 RAD21L1Q9H4I0 556 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 ZMYM3Q14202 1370 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 PHF2O75151 1096 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 ITGA3P26006 1051 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 KYNUQ16719 465 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 C6orf62Q9GZU0 229 aaPredicted RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 ASS1P00966 412 aaKnown RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 ITGA4P13612 1032 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 PSMB9P28065 219 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 MAGEA10P43363 369 aaPredicted RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 OVGP1Q12889 678 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 NAA30Q147X3 362 aaPredicted RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 RUVBL2Q9Y230 463 aaKnown RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 KRT6AP02538 564 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 KRT6BP04259 564 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 TARSP26639 723 aaKnown RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 GRK3P35626 688 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 IL6STP40189 918 aaPredicted RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 KRT6CP48668 564 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 NUP107P57740 925 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 DSG1Q02413 1049 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 TTLL9Q3SXZ7 439 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 ADGRF4Q8IZF3 695 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 KIRREL3Q8IZU9 778 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 CCDC33Q8N5R6 958 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 CCT8L2Q96SF2 557 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 SLC9A7Q96T83 725 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 SENP2Q9HC62 589 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 CYP4F12Q9HCS2 524 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 NDOR1Q9UHB4 597 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 DYRK1BQ9Y463 629 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 TRPC5OSA6NMA1 111 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 PSMD12O00232 456 aaPredicted RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 CYP2E1P05181 493 aaPredicted RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 PTGER2P43116 358 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 C1DQ13901 141 aaKnown RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 PFKFB3Q16875 520 aaPredicted RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 CDK20Q8IZL9 346 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 CYP4Z2PQ8N1L4 340 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 SPATA4Q8NEY3 305 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 ACSF2Q96CM8 615 aaPredicted RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 IPPQ9Y573 584 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 AP4S1Q9Y587 144 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 EDC4Q6P2E9 1401 aaKnown RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 ZNF189O75820 626 aaPredicted RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 MMP10P09238 476 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 ZCCHC18P0CG32 403 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 FGFR1P11362 822 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 PIK3R1P27986 724 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 IL5RAQ01344 420 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 MTSS1LQ765P7 747 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 ABI2Q9NYB9 513 aaPredicted RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 CHKBQ9Y259 395 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 PCDHB7Q9Y5E2 793 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 PRAMEF22A3QJZ6 481 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 IGF2BP3O00425 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 ECE2O60344 883 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 SCGNO76038 276 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 TDP2O95551 362 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 STIP1P31948 543 aaKnown RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 FNTAP49354 379 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 NFYCQ13952 458 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 FAM83EQ2M2I3 478 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 MIIPQ5JXC2 388 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 SYTL1Q8IYJ3 562 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 XPO6Q96QU8 1125 aaKnown RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 RPS6KA5O75582 802 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 PPP1R37O75864 691 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 UMPSP11172 480 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 COPAP53621 1224 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 BYSLQ13895 437 aaKnown RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 GOLGA7BQ2TAP0 167 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 TRPM8Q7Z2W7 1104 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 RD3Q7Z3Z2 195 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 R3HCC1LQ7Z5L2 792 aaKnown RBP16.4■□□□□ 0.22
PPM1E-201ENST00000308249 ZNF333Q96JL9 665 aa16.4■□□□□ 0.22
PPM1E-201ENST00000308249 FAM20BO75063 409 aa16.39■□□□□ 0.22
PPM1E-201ENST00000308249 ATP1A4Q13733 1029 aa16.39■□□□□ 0.22
PPM1E-201ENST00000308249 STARD3Q14849 445 aa16.39■□□□□ 0.22
PPM1E-201ENST00000308249 PDK1Q15118 436 aa16.39■□□□□ 0.22
PPM1E-201ENST00000308249 GPR108Q9NPR9 543 aa16.39■□□□□ 0.22
PPM1E-201ENST00000308249 KLHL3Q9UH77 587 aa16.39■□□□□ 0.22
PPM1E-201ENST00000308249 PCF11O94913 1555 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms