RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GNL1P36915 607 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-248ENST00000558190 ERVK-9P63128 1117 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF804AQ7Z570 1209 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 APRTP07741 180 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 ARL4AP40617 200 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 CCNG2Q16589 344 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PYDC2Q56P42 97 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 NECAB2Q7Z6G3 386 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 LRRC17Q8N6Y2 441 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 MAGEE2Q8TD90 523 aaPredicted RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 URB1O60287 2271 aaKnown RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 GUCA1CO95843 209 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 RALAP11233 206 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 GTF2H1P32780 548 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PEX3P56589 373 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PWP1Q13610 501 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 DENND6AQ8IWF6 608 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 FAM162AQ96A26 154 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC59Q9P031 241 aaKnown RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 TRPC5OSA6NMA1 111 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 ME2P23368 584 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 COG2Q14746 738 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PARP10Q53GL7 1025 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PASD1Q8IV76 773 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 TCP10LQ8TDR4 215 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 SERHL2Q9H4I8 314 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 SERHLQ9NQF3 203 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 RAD54BQ9Y620 910 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 RASSF9O75901 435 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 OASLQ15646 514 aaKnown RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 TAB1Q15750 504 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 XKR5Q6UX68 686 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 GIMAP8Q8ND71 665 aaPredicted RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 TATDN2Q93075 761 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF496Q96IT1 587 aaPredicted RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 SPON2Q9BUD6 331 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 C1orf112Q9NSG2 853 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 ETNK2Q9NVF9 386 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 GCNT4Q9P109 453 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PRLP01236 227 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 VAC14Q08AM6 782 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 FRMD7Q6ZUT3 714 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 RALGPS2Q86X27 583 aaPredicted RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PI4K2BQ8TCG2 481 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PLAGL2Q9UPG8 496 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 A0A1B0GW55 424 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 DUX4L2P0CJ85 424 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 DUX4L3P0CJ86 424 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 DUX4L4P0CJ87 422 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 DUX4L5P0CJ88 424 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 DUX4L6P0CJ89 424 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 DUX4L7P0CJ90 424 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 SLC5A3P53794 718 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 CYFIP1Q7L576 1253 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 VN1R5Q7Z5H4 357 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 SCAIQ8N9R8 606 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 CABLES1Q8TDN4 633 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 SDR42E1Q8WUS8 393 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 ELMO1Q92556 727 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PAGR1Q9BTK6 254 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 TUFT1Q9NNX1 390 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 DUX4Q9UBX2 424 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 ANAPC7Q9UJX3 599 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 FNDC3AQ9Y2H6 1198 aaKnown RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 ZSCAN5CA6NGD5 496 aaPredicted RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 A8MUI8 341 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 AGPSO00116 658 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 ZMPSTE24O75844 475 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 FUT4P22083 530 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 FASP25445 335 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 NCKAP1LP55160 1127 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 MYL7Q01449 175 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PPIL6Q8IXY8 311 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 MSL3Q8N5Y2 521 aaKnown RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 PPHLN1Q8NEY8 458 aaKnown RBP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 UBA3Q8TBC4 463 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 LRRC4BQ9NT99 713 aa3.84□□□□□ -1.8
ATXN3-248ENST00000558190 WRNQ14191 1432 aaPredicted RBP eCLIP3.84□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC162PA2VCL2 907 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 NOS1APO75052 506 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TRMT5Q32P41 509 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SPDYCQ5MJ68 293 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 NEK5Q6P3R8 708 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SLC26A11Q86WA9 606 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 RNF26Q9BY78 433 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CROTQ9UKG9 612 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PACSIN3Q9UKS6 424 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SRRM3A6NNA2 597 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 OPLAHO14841 1288 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UGT1A9O60656 530 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CSPG5O95196 566 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ATG7O95352 703 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 DBTP11182 482 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UGT1A6P19224 532 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UGT1A1P22309 533 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UGT1A4P22310 534 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UGT1A3P35503 534 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UGT1A5P35504 534 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SPDYE2Q495Y8 402 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms