RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 LILRA4P59901 499 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 IFIT5Q13325 482 aaKnown RBP5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 PICALMQ13492 652 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 SF3B3Q15393 1217 aaKnown RBP5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 MGAT5BQ3V5L5 792 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 C3orf38Q5JPI3 329 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 RBM20Q5T481 1227 aaKnown RBP5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 SFRP4Q6FHJ7 346 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 CYB5RLQ6IPT4 315 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 VRK3Q8IV63 474 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 Q8N1X5 172 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 SLC30A5Q8TAD4 765 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 RAPGEF4Q8WZA2 1011 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 LARP4BQ92615 738 aaKnown RBP5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 Q96MF0 132 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 PRRX2Q99811 253 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 DPH1Q9BZG8 443 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 ARNT2Q9HBZ2 717 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 PNPLA8Q9NP80 782 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 CORO2BQ9UQ03 480 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 A0A087WWL8 130 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 TRIM43BA6NCK2 446 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 APAF1O14727 1248 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 PMM2O15305 246 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 EGR2P11161 476 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 ITIH3Q06033 890 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 FSTL1Q12841 308 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 BOP1Q14137 746 aaKnown RBP5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 C11orf96Q7Z7L8 435 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 KRT78Q8N1N4 520 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 FUBP1Q96AE4 644 aaKnown RBP5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 TRIM43Q96BQ3 446 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 NMD3Q96D46 503 aaKnown RBP5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 FBXL20Q96IG2 436 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 OSBPL9Q96SU4 736 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 NELL2Q99435 816 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 STK31Q9BXU1 1019 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 KCTD5Q9NXV2 234 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 STK32BQ9NY57 414 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 HDAC9Q9UKV0 1011 aa5.97□□□□□ -1.45
HMGB1P38-201ENST00000490557 TMEM233B4DJY2 109 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 PYCARD-AS1I3L0S3 204 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 DCLK1O15075 740 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 YY2O15391 372 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 SRGNP10124 158 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 PPP3CBP16298 524 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 KLRC1P26715 233 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 LRPAP1P30533 357 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 TOB1P50616 345 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 ZNF134P52741 427 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 RPS16P62249 146 aaKnown RBP5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 MPP3Q13368 585 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 FHL2Q14192 279 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 E2F2Q14209 437 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 ARHGAP40Q5TG30 622 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 DCAF12L1Q5VU92 463 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 ICE2Q659A1 982 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 LAIR1Q6GTX8 287 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 TMPRSS9Q7Z410 1059 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 ULK2Q8IYT8 1036 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 LNX2Q8N448 690 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 IPCEF1Q8WWN9 437 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 PHKBQ93100 1093 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 SPSB4Q96A44 273 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 FAM136AQ96C01 138 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 PGBD1Q96JS3 809 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 COQ10AQ96MF6 247 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 TTPALQ9BTX7 342 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 PTDSS2Q9BVG9 487 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 ACTRT3Q9BYD9 372 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 SMURF2Q9HAU4 748 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 LRIT1Q9P2V4 623 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 ITGB1BP2Q9UKP3 347 aa5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P38-201ENST00000490557 ANO9A1A5B4 782 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 MBD3L4A6NDZ8 208 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 MBD3L3A6NE82 208 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 CYR61O00622 381 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 ORC4O43929 436 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 RAMP2O60895 175 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 MYL3P08590 195 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 PRKAG1P54619 331 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 NXPH1P58417 271 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 SCAPQ12770 1279 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 PLA1AQ53H76 456 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 HECTD2Q5U5R9 776 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 Q6YL49 198 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 Q6ZNX1 250 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 ZNF627Q7L945 461 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 SESTD1Q86VW0 696 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 CCDC33Q8N5R6 958 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 SMCR8Q8TEV9 937 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 LPIN2Q92539 896 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 PPP1R9BQ96SB3 815 aa5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 STRBPQ96SI9 672 aaKnown RBP5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 UNKQ9C0B0 810 aaKnown RBP5.95□□□□□ -1.46
HMGB1P38-201ENST00000490557 PPIFP30405 207 aaKnown RBP5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 ACVRL1P37023 503 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 MRPS35P82673 323 aaKnown RBP5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 HDAC1Q13547 482 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms