RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 STX18Q9P2W9 335 aaKnown RBP8.77□□□□□ -1.01
VPS36-201ENST00000378060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.77□□□□□ -1.01
VPS36-201ENST00000378060 MAST2Q6P0Q8 1798 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 CENPFP49454 3210 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 MAGEA13PA6NCF6 341 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 EIF4E1BA6NMX2 242 aaKnown RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 ZBBXA8MT70 800 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 ATMINO43313 823 aaPredicted RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 MED24O75448 989 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 ANP32DO95626 131 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 SREBF1P36956 1147 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 CCNG2Q16589 344 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 LRRC8EQ6NSJ5 796 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 FRA10AC1Q70Z53 315 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 PCYOX1LQ8NBM8 494 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 LRRN4CLQ8ND94 238 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 NKX2-3Q8TAU0 364 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 TMC2Q8TDI7 906 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 EPS8L3Q8TE67 593 aaKnown RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 MED15Q96RN5 788 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 DUSP9Q99956 384 aaKnown RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 CDC42EP4Q9H3Q1 356 aaKnown RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 PKD2L2Q9NZM6 624 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 DLGAP2Q9P1A6 1054 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 INPP5FQ9Y2H2 1132 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 SLC4A7Q9Y6M7 1214 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 CDK5RAP2Q96SN8 1893 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 FAM205AQ6ZU69 1335 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 ENO4A6NNW6 628 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 GMPSP49915 693 aaPredicted RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 BAATQ14032 418 aaPredicted RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 KIF22Q14807 665 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 TWF2Q6IBS0 349 aaKnown RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 CREG2Q8IUH2 290 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 APOBEC3FQ8IUX4 373 aaKnown RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 CCNJLQ8IV13 435 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 FAM151AQ8WW52 585 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 ULK4Q96C45 1275 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 THAP11Q96EK4 314 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 TSPAN17Q96FV3 270 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 PGM2Q96G03 612 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 ASPSCR1Q9BZE9 553 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 GGA2Q9UJY4 613 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 PRDM4Q9UKN5 801 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 TBX20Q9UMR3 447 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 AGAP1Q9UPQ3 857 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 FNDC3AQ9Y2H6 1198 aaKnown RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 POLBP06746 335 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 NLRP11P59045 1033 aaKnown RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 TSTA3Q13630 321 aaPredicted RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 PDK1Q15118 436 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 Q3C1V9 767 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 SAMD3Q8N6K7 520 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 EME1Q96AY2 570 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 NAT9Q9BTE0 207 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 ZNF518BQ9C0D4 1074 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 RPAP3Q9H6T3 665 aaPredicted RBP8.76□□□□□ -1.01
VPS36-201ENST00000378060 PCMTD2Q9NV79 361 aa8.76□□□□□ -1.01
VPS36-201ENST00000378060 ATP9BO43861 1147 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ADCY3O60266 1144 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 AKAP3O75969 853 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 KRT16P08779 473 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 HSPA13P48723 471 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 EMC2Q15006 297 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 GPAT2Q6NUI2 795 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ARID3BQ8IVW6 561 aaPredicted RBP8.75□□□□□ -1.01
VPS36-201ENST00000378060 KIAA0895Q8NCT3 520 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 EXD1Q8NHP7 514 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ASAP3Q8TDY4 903 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ATXN2LQ8WWM7 1075 aaKnown RBP8.75□□□□□ -1.01
VPS36-201ENST00000378060 RUSC1Q9BVN2 902 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ADAM33Q9BZ11 813 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 RXFP1Q9HBX9 757 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 KCNH7Q9NS40 1196 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ZNF446Q9NWS9 450 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 MARCOQ9UEW3 520 aaPredicted RBP8.75□□□□□ -1.01
VPS36-201ENST00000378060 C16orf96A6NNT2 1141 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 TRIM49D1C9J1S8 452 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 FZD9O00144 591 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ANGPT2O15123 496 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 MAGEB2O15479 319 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 RPS6KA5O75582 802 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 APOA4P06727 396 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 GARTP22102 1010 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ACADSBP45954 432 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 CASP4P49662 377 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 PMS1P54277 932 aaKnown RBP8.75□□□□□ -1.01
VPS36-201ENST00000378060 TPI1P60174 286 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 SLC20A2Q08357 652 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 LAMB3Q13751 1172 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 KIAA1841Q6NSI8 718 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 YTHDF3Q7Z739 585 aaKnown RBP8.75□□□□□ -1.01
VPS36-201ENST00000378060 APBB2Q92870 758 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 SPATA33Q96N06 139 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 SH2D3AQ9BRG2 576 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 GDF3Q9NR23 364 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 HEY2Q9UBP5 337 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms