RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 RGL4Q8IZJ4 473 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 TMEM130Q8N3G9 435 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 EFHBQ8N7U6 833 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 C3orf58Q8NDZ4 430 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 ZSWIM2Q8NEG5 633 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.09□□□□□ -1.27
BRCC3-209ENST00000620502 SCFD1Q8WVM8 642 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 C18orf25Q96B23 403 aaPredicted RBP7.09□□□□□ -1.27
BRCC3-209ENST00000620502 SCARF2Q96GP6 870 aaPredicted RBP7.09□□□□□ -1.27
BRCC3-209ENST00000620502 B3GALT6Q96L58 329 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 ASB2Q96Q27 587 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 MSTO1Q9BUK6 570 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 GPR62Q9BZJ7 368 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 TLE6Q9H808 572 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 TMEM206Q9H813 350 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 PLEKHA5Q9HAU0 1116 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 GOLGA2P5Q9HBQ8 144 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 ENTPD7Q9NQZ7 604 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 CHST7Q9NS84 486 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 CHMP5Q9NZZ3 219 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 CLEC1BQ9P126 229 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 ZFATQ9P243 1243 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 STK39Q9UEW8 545 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 ADAM28Q9UKQ2 775 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 AGO2Q9UKV8 859 aaKnown RBP7.09□□□□□ -1.27
BRCC3-209ENST00000620502 EXOC7Q9UPT5 735 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.09□□□□□ -1.27
BRCC3-209ENST00000620502 KCNMB2Q9Y691 235 aa7.09□□□□□ -1.27
BRCC3-209ENST00000620502 TRANK1O15050 2925 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 VWA8A3KMH1 1905 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 TMEM189-UBE2V1I3L0A0 370 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 EIF3DO15371 548 aaKnown RBP eCLIP7.08□□□□□ -1.28
BRCC3-209ENST00000620502 TGFB1I1O43294 461 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 CLASP2O75122 1294 aaKnown RBP7.08□□□□□ -1.28
BRCC3-209ENST00000620502 GADD45BO75293 160 aaPredicted RBP7.08□□□□□ -1.28
BRCC3-209ENST00000620502 TBX10O75333 385 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 TADA2AO75478 443 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 RPN1P04843 607 aaKnown RBP7.08□□□□□ -1.28
BRCC3-209ENST00000620502 MYL1P05976 194 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 NFKB1P19838 968 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 GARTP22102 1010 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 KCNA5P22460 613 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 DGKGP49619 791 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 KCNQ1P51787 676 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 POU5F1Q01860 360 aaKnown RBP7.08□□□□□ -1.28
BRCC3-209ENST00000620502 DSG1Q02413 1049 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 STK4Q13043 487 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 PSMD2Q13200 908 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 POSTNQ15063 836 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 BMT2Q1RMZ1 405 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 LEXMQ3ZCV2 418 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 FAM26FQ5R3K3 315 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 FUT10Q6P4F1 479 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 LINC00114Q6XXX2 140 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 SYCP3Q8IZU3 236 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 BEND7Q8N7W2 519 aaPredicted RBP7.08□□□□□ -1.28
BRCC3-209ENST00000620502 HASPINQ8TF76 798 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 SLC22A17Q8WUG5 538 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 POMGNT1Q8WZA1 660 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 MSLNLQ96KJ4 702 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 UROC1Q96N76 676 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 KLHL5Q96PQ7 755 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 TSPAN18Q96SJ8 248 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 CDCA3Q99618 268 aaPredicted RBP7.08□□□□□ -1.28
BRCC3-209ENST00000620502 CBWD1Q9BRT8 395 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 HERC2P3Q9BVR0 1158 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 RPF1Q9H9Y2 349 aaKnown RBP7.08□□□□□ -1.28
BRCC3-209ENST00000620502 RXFP1Q9HBX9 757 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 SLC39A2Q9NP94 309 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 MRPL17Q9NRX2 175 aaKnown RBP7.08□□□□□ -1.28
BRCC3-209ENST00000620502 SLC38A7Q9NVC3 462 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 CLDND1Q9NY35 253 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 TUBGCP4Q9UGJ1 667 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 COL6A3P12111 3177 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 PLXNA3P51805 1871 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 EYSQ5T1H1 3165 aa7.08□□□□□ -1.28
BRCC3-209ENST00000620502 REV3LO60673 3130 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-209ENST00000620502 GOLGA8IPA6NC78 632 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 GOLGA8JA6NMD2 632 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 H3BQ06 376 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-209ENST00000620502 RNF225M0QZC1 329 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-209ENST00000620502 PODXLO00592 558 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 B3GAT3O94766 335 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 RHOBTB3O94955 611 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 MAP3K6O95382 1288 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 LDHAP00338 332 aaKnown RBP7.07□□□□□ -1.28
BRCC3-209ENST00000620502 CNPP09543 421 aaKnown RBP7.07□□□□□ -1.28
BRCC3-209ENST00000620502 CYP3A5P20815 502 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 AMPD1P23109 780 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 TARSP26639 723 aaKnown RBP7.07□□□□□ -1.28
BRCC3-209ENST00000620502 RPL9P32969 192 aaKnown RBP7.07□□□□□ -1.28
BRCC3-209ENST00000620502 BRCC3P46736 316 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 GLUD2P49448 558 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 FAM160A1Q05DH4 1040 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 PPP2R3AQ06190 1150 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 BMS1Q14692 1282 aaKnown RBP7.07□□□□□ -1.28
BRCC3-209ENST00000620502 USP41Q3LFD5 358 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 RTP2Q5QGT7 225 aa7.07□□□□□ -1.28
BRCC3-209ENST00000620502 FAM171A1Q5VUB5 890 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms