RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ZNF483Q8TF39 744 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-210ENST00000553455 RAPGEF4Q8WZA2 1011 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 C18orf8Q96DM3 657 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 FAM89AQ96GI7 184 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 SLC46A1Q96NT5 459 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 TRIB1Q96RU8 372 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 SMOQ99835 787 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 ZSWIM1Q9BR11 485 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 MESP1Q9BRJ9 268 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 STK33Q9BYT3 514 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 REXO4Q9GZR2 422 aaKnown RBP6.24□□□□□ -1.41
SYNE2-210ENST00000553455 AS3MTQ9HBK9 375 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 MID2Q9UJV3 735 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 ITGB1BP2Q9UKP3 347 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 XDHP47989 1333 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 CCDC195A0A1B0GUA6 201 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 AHRRA9YTQ3 701 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 CYP27B1O15528 508 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 PIP5K1CO60331 668 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 A1BGP04217 495 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 ELANEP08246 267 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 TYRP1P17643 537 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 HSD11B2P80365 405 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 MC2RQ01718 297 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 ZNF844Q08AG5 666 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 RRP1BQ14684 758 aaKnown RBP6.23□□□□□ -1.41
SYNE2-210ENST00000553455 RRAGBQ5VZM2 374 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 ANO1Q5XXA6 986 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 TAF2Q6P1X5 1199 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 RNF44Q7L0R7 432 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 BEND5Q7L4P6 421 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 SYTL1Q8IYJ3 562 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 TXLNBQ8N3L3 684 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 VGLL2Q8N8G2 317 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 POC1BQ8TC44 478 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 EDAQ92838 391 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 ZNF566Q969W8 418 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 TTYH3Q9C0H2 523 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 SMOC2Q9H3U7 446 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 RNPEPQ9H4A4 650 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 ZNF212Q9UDV6 495 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 MAN2B2Q9Y2E5 1009 aa6.23□□□□□ -1.41
SYNE2-210ENST00000553455 DIRC3C9JPN6 131 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 AREL1O15033 823 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 RASSF9O75901 435 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 SUN1O94901 812 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 ZFPL1O95159 310 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 IL1R2P27930 398 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 HIBADHP31937 336 aaKnown RBP6.22□□□□□ -1.41
SYNE2-210ENST00000553455 HALP42357 657 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 ZNF134P52741 427 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 STARD3Q14849 445 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 ZIK1Q3SY52 487 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-210ENST00000553455 CCDC174Q6PII3 467 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 SLC30A10Q6XR72 485 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 NKAPQ8N5F7 415 aaKnown RBP6.22□□□□□ -1.41
SYNE2-210ENST00000553455 DCLRE1CQ96SD1 692 aaKnown RBP6.22□□□□□ -1.41
SYNE2-210ENST00000553455 TBC1D23Q9NUY8 699 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 EIF2B4Q9UI10 523 aaKnown RBP6.22□□□□□ -1.41
SYNE2-210ENST00000553455 ATP11BQ9Y2G3 1177 aa6.22□□□□□ -1.41
SYNE2-210ENST00000553455 MARCH11A6NNE9 402 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 TRIM24O15164 1050 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 NDST3O95803 873 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 CYP2C9P11712 490 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 MYL4P12829 197 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 KCNA2P16389 499 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 BTF3P20290 206 aaKnown RBP6.21□□□□□ -1.42
SYNE2-210ENST00000553455 ACVR2AP27037 513 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 GABRB3P28472 473 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 PDIA3P30101 505 aaKnown RBP6.21□□□□□ -1.42
SYNE2-210ENST00000553455 ALDH9A1P49189 494 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 IQCB1Q15051 598 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 PUM3Q15397 648 aaKnown RBP6.21□□□□□ -1.42
SYNE2-210ENST00000553455 ZRSR2Q15696 482 aaKnown RBP6.21□□□□□ -1.42
SYNE2-210ENST00000553455 PLA1AQ53H76 456 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 FCRL6Q6DN72 434 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-210ENST00000553455 GDF7Q7Z4P5 450 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 ZNF280BQ86YH2 543 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 MAPKAPK5Q8IW41 473 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 YAF2Q8IY57 180 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 SDR16C5Q8N3Y7 309 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 CYP2W1Q8TAV3 490 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 LRRC46Q96FV0 321 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 MED15Q96RN5 788 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 HEPHQ9BQS7 1158 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 HERPUD2Q9BSE4 406 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 XPNPEP3Q9NQH7 507 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 HDAC9Q9UKV0 1011 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 SORCS3Q9UPU3 1222 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 CEP83Q9Y592 693 aa6.21□□□□□ -1.42
SYNE2-210ENST00000553455 LOC102723971A0A1B0GUV8 181 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 FAM234BA2RU67 622 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 H7C4K7 107 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 RPS6KA4O75676 772 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 GPANK1O95872 356 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 ATXN1LP0C7T5 689 aaKnown RBP6.2□□□□□ -1.42
SYNE2-210ENST00000553455 SPATA31D3P0C874 917 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms