RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TMEM196Q5HYL7 178 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 SPATA1Q5VX52 437 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 C9orf57Q5W0N0 161 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 CHFRQ96EP1 664 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 PNMA5Q96PV4 448 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 HHIPQ96QV1 700 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 HPS4Q9NQG7 708 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 HSFX1Q9UBD0 423 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 KCNG1Q9UIX4 513 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 MYO16Q9Y6X6 1858 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 OGTO15294 1046 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 ATG13O75143 517 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 KCNK5O95279 499 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 EGFP01133 1207 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 WEE1P30291 646 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 AVPR1AP37288 418 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 PRPHP41219 470 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 SLC12A3P55017 1021 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 NCKAP1LP55160 1127 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 SHC2P98077 582 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 BFSP1Q12934 665 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 RUNX3Q13761 415 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 KYAT1Q16773 422 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 PLA2G2CQ5R387 149 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 RNF43Q68DV7 783 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 NAIF1Q69YI7 327 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 PSAPL1Q6NUJ1 521 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 CMTM8Q8IZV2 173 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 MAB21L3Q8N8X9 362 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 SYT2Q8N9I0 419 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 STKLD1Q8NE28 680 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 TTC16Q8NEE8 873 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 CDK5RAP3Q96JB5 506 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 FAM83CQ9BQN1 747 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 ZCWPW1Q9H0M4 648 aa15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 ABI2Q9NYB9 513 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 LARSQ9P2J5 1176 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-206ENST00000538456 KIAA1549LQ6ZVL6 1849 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 CCDC163A0A0D9SF12 145 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 H0YCG3 227 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 K7ENM7 598 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 PLA2G4BP0C869 781 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 ARSAP15289 507 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 TMEM132DQ14C87 1099 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 USP13Q92995 863 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 PYM1Q9BRP8 204 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 MSTO1Q9BUK6 570 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 LSM14BQ9BX40 385 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 FBRSL1Q9HCM7 1045 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 VPS45Q9NRW7 570 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 TBX20Q9UMR3 447 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 PCDHGA5Q9Y5G8 931 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 ASPMQ8IZT6 3477 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 NUP205Q92621 2012 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 IGF2RP11717 2491 aa15.15■□□□□ 0.02
SMARCA4-206ENST00000538456 PIRO00625 290 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 CYB561D2O14569 222 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 TRDMT1O14717 391 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 DCLK1O15075 740 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 CYP11A1P05108 521 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 NLRP12P59046 1061 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 CREB5Q02930 508 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 ELF2Q15723 593 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 PLK5Q496M5 336 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 ARSHQ5FYA8 562 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 HYIQ5T013 277 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 TXNDC8Q6A555 127 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 CC2D1AQ6P1N0 951 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 TMEM150AQ86TG1 271 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 LRRTM3Q86VH5 581 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 METTL23Q86XA0 190 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 RPLP0P6Q8NHW5 317 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 RIN3Q8TB24 985 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 ZC3H10Q96K80 434 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 TSPAN18Q96SJ8 248 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 REEP2Q9BRK0 252 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 EDEM2Q9BV94 578 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 TDP1Q9NUW8 608 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 KCND2Q9NZV8 630 aa15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 MAGED2Q9UNF1 606 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-206ENST00000538456 A0A0B4J269 797 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 ANO9A1A5B4 782 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 VWA3AA6NCI4 1184 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 AKAP3O75969 853 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 NEFLP07196 543 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 ADRB2P07550 413 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 HAPLN1P10915 354 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 GPR15P49685 360 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 ACOT2P49753 483 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 GALK1P51570 392 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 DHX8Q14562 1220 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 WSCD1Q658N2 575 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 SLC39A4Q6P5W5 647 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 GPBP1Q86WP2 473 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 THEM5Q8N1Q8 247 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 CAMKK1Q8N5S9 505 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 MYCT1Q8N699 235 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 SPPL2BQ8TCT7 592 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms