RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CDK11AQ9UQ88 783 aaPredicted RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 CCDC9Q9Y3X0 531 aaKnown RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 LY6G6EA0A0G2JKS1 128 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 FAM171A2A8MVW0 826 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 H0YIZ8 118 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 H3BNX3 289 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 NEMP1O14524 444 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 DSCR3O14972 297 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 GRM6O15303 877 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 SLC43A1O75387 559 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 SOAT2O75908 522 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 CRYABP02511 175 aaKnown RBP1.22□□□□□ -2.21
COPB1-212ENST00000534771 SBK3P0C264 359 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 T-ENOLP0DO92 83 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 TGFB3P10600 412 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 PRF1P14222 555 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 ATP5F1P24539 256 aaPredicted RBP1.22□□□□□ -2.21
COPB1-212ENST00000534771 CDKN2AP42771 156 aaKnown RBP1.22□□□□□ -2.21
COPB1-212ENST00000534771 NDUFV1P49821 464 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 SESN3P58005 492 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 MC2RQ01718 297 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 RHDQ02161 417 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 MGAT2Q10469 447 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 GTF2H3Q13889 308 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 TRIM71Q2Q1W2 868 aaKnown RBP1.22□□□□□ -2.21
COPB1-212ENST00000534771 TBC1D25Q3MII6 688 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 LEXMQ3ZCV2 418 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 UBAP2Q5T6F2 1119 aaKnown RBP1.22□□□□□ -2.21
COPB1-212ENST00000534771 C10orf25Q5T742 122 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 ZNF618Q5T7W0 954 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 TAPT1Q6NXT6 567 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 LVRNQ6Q4G3 990 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 C18orf65Q6ZTR6 163 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 KCNK18Q7Z418 384 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 PIM3Q86V86 326 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 DCP1BQ8IZD4 617 aaKnown RBP1.22□□□□□ -2.21
COPB1-212ENST00000534771 TGFBRAP1Q8WUH2 860 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 LMBR1Q8WVP7 490 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 CUL5Q93034 780 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 SMOQ99835 787 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 C7orf25Q9BPX7 421 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 FAM118BQ9BPY3 351 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 TARS2Q9BW92 718 aaKnown RBP1.22□□□□□ -2.21
COPB1-212ENST00000534771 QRSL1Q9H0R6 528 aaKnown RBP1.22□□□□□ -2.21
COPB1-212ENST00000534771 SLCO5A1Q9H2Y9 848 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 KANSL2Q9H9L4 492 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 DMRT3Q9NQL9 472 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 DLL3Q9NYJ7 618 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 DNM3Q9UQ16 869 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 PCDHGA2Q9Y5H1 932 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 SQORQ9Y6N5 450 aa1.22□□□□□ -2.21
COPB1-212ENST00000534771 POC1B-GALNT4F8VUJ3 575 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 FZD9O00144 591 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 GTPBP1O00178 669 aaKnown RBP1.21□□□□□ -2.22
COPB1-212ENST00000534771 POLRMTO00411 1230 aaKnown RBP1.21□□□□□ -2.22
COPB1-212ENST00000534771 SMAD6O43541 496 aaKnown RBP1.21□□□□□ -2.22
COPB1-212ENST00000534771 ZEB2O60315 1214 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 HTR6P50406 440 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 SLC5A3P53794 718 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 PDE1AP54750 535 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 SCAND1P57086 179 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 GHRHRQ02643 423 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 CERKLQ49MI3 558 aaPredicted RBP1.21□□□□□ -2.22
COPB1-212ENST00000534771 TOR2AQ5JU69 321 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 RBM20Q5T481 1227 aaKnown RBP1.21□□□□□ -2.22
COPB1-212ENST00000534771 TEDDM1Q5T9Z0 273 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 MEX3CQ5U5Q3 659 aaKnown RBP1.21□□□□□ -2.22
COPB1-212ENST00000534771 NAPRTQ6XQN6 538 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 TRIM72Q6ZMU5 477 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 PARS2Q7L3T8 475 aaKnown RBP1.21□□□□□ -2.22
COPB1-212ENST00000534771 RSPH3Q86UC2 560 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 DTX2Q86UW9 622 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 ADHFE1Q8IWW8 467 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 RHOT1Q8IXI2 618 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 CMIPQ8IY22 773 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 DHX37Q8IY37 1157 aaKnown RBP1.21□□□□□ -2.22
COPB1-212ENST00000534771 NIM1KQ8IY84 436 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 GALNT4Q8N4A0 578 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 SPEM1Q8N4L4 309 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 DCBLD1Q8N8Z6 715 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 CLRN3Q8NCR9 226 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 TMIEQ8NEW7 156 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 OR2I1PQ8NGU4 316 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 CYP2W1Q8TAV3 490 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 KLHDC4Q8TBB5 520 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 LEO1Q8WVC0 666 aaPredicted RBP1.21□□□□□ -2.22
COPB1-212ENST00000534771 DPF2Q92785 391 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 USP7Q93009 1102 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 FAM136AQ96C01 138 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 MRFAP1L1Q96HT8 127 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 RITA1Q96K30 269 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 ZPBPQ9BS86 351 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 PACSIN1Q9BY11 444 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 OSBPL2Q9H1P3 480 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 DUSP22Q9NRW4 184 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 IGSF5Q9NSI5 407 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 KLHL13Q9P2N7 655 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 PI4KBQ9UBF8 816 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 SLC45A2Q9UMX9 530 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 SCAF8Q9UPN6 1271 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms