RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ACADSBP45954 432 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 RGS7P49802 495 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 SLC26A2P50443 739 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 DDR1Q08345 913 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 DCAF4L1Q3SXM0 396 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 NBPF12Q5TAG4 269 aaPredicted RBP16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 TTC39BQ5VTQ0 682 aaPredicted RBP16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 POTEAQ6S8J7 498 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 ACTRT1Q8TDG2 376 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 EGFL8Q99944 293 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 STX18Q9P2W9 335 aaKnown RBP16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 PCSK1P29120 753 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 HDAC4P56524 1084 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 TBCCQ15814 346 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 SYCP2LQ5T4T6 812 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 SCHIP1Q9P0W5 487 aaPredicted RBP16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 SPRP35270 261 aaPredicted RBP16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 GIT2Q14161 759 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 ZNF235Q14590 738 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 GPAT2Q6NUI2 795 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 MYCBPAPQ8TBZ2 947 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 MANSC1Q9H8J5 431 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 GRID1Q9ULK0 1009 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 PNPLA4P41247 253 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 GEMIN4P57678 1058 aaKnown RBP16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 INPP5AQ14642 412 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 MDH1BQ5I0G3 518 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 C4orf19Q8IY42 314 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 CMTM5Q96DZ9 223 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 FAM118BQ9BPY3 351 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 PDCD2LQ9BRP1 358 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 MRIQ9BWK5 157 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 LACRTQ9GZZ8 138 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 PXMP2Q9NR77 195 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 OGTO15294 1046 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 ABCE1P61221 599 aaKnown RBP16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 GNASQ5JWF2 1037 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 MDM1Q8TC05 714 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 SYTL5Q8TDW5 730 aaPredicted RBP16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 DNAJC9Q8WXX5 260 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 AGAP3Q96P47 875 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 CCDC90BQ9GZT6 254 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 SEMA6BQ9H3T3 888 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 MARCOQ9UEW3 520 aaPredicted RBP16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 MYOM1P52179 1685 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 PSTPIP1O43586 416 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 GARTP22102 1010 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 NNMTP40261 264 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 B2RBV5 119 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 IGF2BP3O00425 579 aaKnown RBP eCLIP16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 ANGPT2O15123 496 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 GTF2H1P32780 548 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 EPHX2P34913 555 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 RGS2P41220 211 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 C16orf89Q6UX73 402 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 KIF2BQ8N4N8 673 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 TSPAN17Q96FV3 270 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 DDX50Q9BQ39 737 aaKnown RBP16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 SPON2Q9BUD6 331 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 TMBIM4Q9HC24 238 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 NSMCE4AQ9NXX6 385 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 ARHGAP26Q9UNA1 814 aa16.88■□□□□ 0.29
HMGXB3-202ENST00000503427 HNRNPH1P31943 449 aaKnown RBP16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 GLB1LQ6UWU2 654 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 MRPL1Q9BYD6 325 aaKnown RBP16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 FOXN3O00409 490 aaPredicted RBP16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 KCNA2P16389 499 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 MYBPC2Q14324 1141 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 APOBEC3HQ6NTF7 200 aaKnown RBP16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 PLEKHH3Q7Z736 793 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 CD302Q8IX05 232 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 LRRC34Q8IZ02 419 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 THTPAQ9BU02 230 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 TRIM54Q9BYV2 358 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 A0A0A6YYK5 440 aaPredicted RBP16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 GPD1P21695 349 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 GRIK1P39086 918 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 NLRP11P59045 1033 aaKnown RBP16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 E2F7Q96AV8 911 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 NSL1Q96IY1 281 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 DPYSL4O14531 572 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 TADA2AO75478 443 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 GFAPP14136 432 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 ITIH4Q14624 930 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 USP10Q14694 798 aaKnown RBP16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 TMEM106CQ9BVX2 250 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 ZNF212Q9UDV6 495 aa16.87■□□□□ 0.29
HMGXB3-202ENST00000503427 RARGP13631 454 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 OAZ1P54368 228 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 FCGRTP55899 365 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 PDK1Q15118 436 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 DAB2IPQ5VWQ8 1189 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 PI4K2AQ9BTU6 479 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 RSPH10B2B2RC85 870 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 NFIBO00712 420 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms