RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ATAT1Q5SQI0 421 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 CCDC149Q6ZUS6 474 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 C11orf57Q6ZUT1 292 aaPredicted RBP14.5□□□□□ -0.09
COL1A1-208ENST00000494334 RTL10Q7L3V2 364 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 CREBRFQ8IUR6 639 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 DCP1BQ8IZD4 617 aaKnown RBP14.5□□□□□ -0.09
COL1A1-208ENST00000494334 ATAD1Q8NBU5 361 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 ENOX1Q8TC92 643 aaKnown RBP14.5□□□□□ -0.09
COL1A1-208ENST00000494334 CNOT6LQ96LI5 555 aaKnown RBP14.5□□□□□ -0.09
COL1A1-208ENST00000494334 RHOBTB2Q9BYZ6 727 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 PRKD2Q9BZL6 878 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 IMPG2Q9BZV3 1241 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 SDCBP2Q9H190 292 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 CRISPLD1Q9H336 500 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 SMYD3Q9H7B4 428 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 TMLHEQ9NVH6 421 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 FAM50BQ9Y247 325 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 NME7Q9Y5B8 376 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 PMM2O15305 246 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 PDGFRBP09619 1106 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 HNRNPA1P09651 372 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL1A1-208ENST00000494334 PCSK1P29120 753 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 HOXA9P31269 272 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 GNL1P36915 607 aaPredicted RBP14.49□□□□□ -0.09
COL1A1-208ENST00000494334 ASPAP45381 313 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 RAP1GAPP47736 663 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 CDR1P51861 262 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 NOP14P78316 857 aaKnown RBP14.49□□□□□ -0.09
COL1A1-208ENST00000494334 TSPY1Q01534 308 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 KCNH2Q12809 1159 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 DUSP4Q13115 394 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 CBX2Q14781 532 aaPredicted RBP14.49□□□□□ -0.09
COL1A1-208ENST00000494334 INTS6LQ5JSJ4 861 aaKnown RBP14.49□□□□□ -0.09
COL1A1-208ENST00000494334 CYP26C1Q6V0L0 522 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 SCARA5Q6ZMJ2 495 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 OR6B3Q8NGW1 331 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 RIPOR3Q96MK2 946 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 PKMYT1Q99640 499 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 SNX25Q9H3E2 840 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 THAP9Q9H5L6 903 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 GTF3C4Q9UKN8 822 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 CDH9Q9ULB4 789 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 SLC27A5Q9Y2P5 690 aa14.49□□□□□ -0.09
COL1A1-208ENST00000494334 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL1A1-208ENST00000494334 TSC2P49815 1807 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 UNC80Q8N2C7 3258 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 MYBPHLA2RUH7 354 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 A8MXQ7 604 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 PRRG1O14668 218 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 CCL16O15467 120 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 ATP2C2O75185 946 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 P4HA1P13674 534 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 MTHFRP42898 656 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 TYRO3Q06418 890 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 SMARCB1Q12824 385 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 CCDC142Q17RM4 750 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 FAM171BQ6P995 826 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 CCDC150Q8NCX0 1101 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 C2orf15Q8WU43 125 aaKnown RBP14.48□□□□□ -0.09
COL1A1-208ENST00000494334 SMG7Q92540 1137 aaKnown RBP14.48□□□□□ -0.09
COL1A1-208ENST00000494334 TATDN2Q93075 761 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 NECTIN4Q96NY8 510 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 SYT15Q9BQS2 421 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 BCO2Q9BYV7 579 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 DNAJC25Q9H1X3 360 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 POMKQ9H5K3 350 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 SAMSN1Q9NSI8 373 aaKnown RBP14.48□□□□□ -0.09
COL1A1-208ENST00000494334 INSL5Q9Y5Q6 135 aa14.48□□□□□ -0.09
COL1A1-208ENST00000494334 P4HA2O15460 535 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 N4BP1O75113 896 aaKnown RBP14.47□□□□□ -0.09
COL1A1-208ENST00000494334 LETM1O95202 739 aaPredicted RBP14.47□□□□□ -0.09
COL1A1-208ENST00000494334 LRG1P02750 347 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 AFPP02771 609 aaKnown RBP14.47□□□□□ -0.09
COL1A1-208ENST00000494334 POU2F2P09086 479 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 PSMC1P62191 440 aaKnown RBP14.47□□□□□ -0.09
COL1A1-208ENST00000494334 TWF1Q12792 350 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 NFE2Q16621 373 aaPredicted RBP14.47□□□□□ -0.09
COL1A1-208ENST00000494334 SKOR2Q2VWA4 1001 aaPredicted RBP14.47□□□□□ -0.09
COL1A1-208ENST00000494334 HSP90AA4PQ58FG1 418 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 WDR44Q5JSH3 913 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 TTC9BQ8N6N2 239 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 SPPL2BQ8TCT7 592 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 FAXDC2Q96IV6 333 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 PHF7Q9BWX1 381 aaPredicted RBP14.47□□□□□ -0.09
COL1A1-208ENST00000494334 NIF3L1Q9GZT8 377 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 DPEP3Q9H4B8 488 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 CYP3A43Q9HB55 503 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 PIDD1Q9HB75 910 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 CRTAC1Q9NQ79 661 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 HSFX1Q9UBD0 423 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 NFE2L3Q9Y4A8 694 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 YIPF1Q9Y548 306 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 PCDHB5Q9Y5E4 795 aa14.47□□□□□ -0.09
COL1A1-208ENST00000494334 XYLBO75191 536 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 SOAT2O75908 522 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 PTPN1P18031 435 aaKnown RBP14.46□□□□□ -0.09
COL1A1-208ENST00000494334 MTIF2P46199 727 aaKnown RBP14.46□□□□□ -0.09
COL1A1-208ENST00000494334 CETN1Q12798 172 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 GRASPQ7Z6J2 395 aaPredicted RBP14.46□□□□□ -0.09
COL1A1-208ENST00000494334 FAM114A1Q8IWE2 563 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms