RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TNNI3P19429 210 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 ERP27Q96DN0 273 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 TPD52L3Q96J77 140 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 RAD21L1Q9H4I0 556 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 RIC8BQ9NVN3 520 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 TRIM3O75382 744 aaPredicted RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 NSUN7Q8NE18 718 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 OR6J1Q8NGC5 347 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 RGS18Q9NS28 235 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 VWA5AO00534 786 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 CYP26A1O43174 497 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 KLHL2O95198 593 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 SERPINH1P50454 418 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 ZNF284Q2VY69 593 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 UNC13DQ70J99 1090 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 PROSER1Q86XN7 944 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 DHX40Q8IX18 779 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 C2orf40Q9H1Z8 148 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 KLF15Q9UIH9 416 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 PSMD3O43242 534 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 IDH3BO43837 385 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 TPP2P29144 1249 aaPredicted RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 CRKLP46109 303 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 BCAP31P51572 246 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 ARF3P61204 181 aaPredicted RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 ARF1P84077 181 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 R3HCC1LQ7Z5L2 792 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 GAS2L3Q86XJ1 694 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 ITIH6Q6UXX5 1313 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L5A8MUK1 530 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 SCRN3Q0VDG4 424 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 CAMK1Q14012 370 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 MROH9Q5TGP6 573 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 CACHD1Q5VU97 1274 aa17.06■□□□□ 0.32
PTCH1-201ENST00000331920 AGO2Q9UKV8 859 aaKnown RBP17.06■□□□□ 0.32
PTCH1-201ENST00000331920 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
PTCH1-201ENST00000331920 EDRF1Q3B7T1 1238 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 XPO6Q96QU8 1125 aaKnown RBP17.05■□□□□ 0.32
PTCH1-201ENST00000331920 RHOBTB2Q9BYZ6 727 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 OSGEPL1Q9H4B0 414 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L15C9J2P7 530 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L13C9JLJ4 530 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L11C9JVI0 530 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L18D6R9N7 530 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L22D6RA61 530 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L17D6RBQ6 530 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L19D6RCP7 530 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L20D6RJB6 530 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 SRP54P61011 504 aaKnown RBP17.05■□□□□ 0.32
PTCH1-201ENST00000331920 TAP1Q03518 808 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 USP17L6PQ6QN14 398 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 TNIP3Q96KP6 325 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 SCP2P22307 547 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 CALR3Q96L12 384 aaKnown RBP17.05■□□□□ 0.32
PTCH1-201ENST00000331920 SPTLC1O15269 473 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 ALDH1A3P47895 512 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 TCEAL5Q5H9L2 206 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 IRAK1BP1Q5VVH5 260 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 ATG16L2Q8NAA4 619 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 KLF6Q99612 283 aaPredicted RBP17.05■□□□□ 0.32
PTCH1-201ENST00000331920 EIF3LQ9Y262 564 aaKnown RBP17.05■□□□□ 0.32
PTCH1-201ENST00000331920 AREL1O15033 823 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 KCNQ3O43525 872 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 AKAP5P24588 427 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 ZNF544Q6NX49 715 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 LINC00301Q8NCQ3 95 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 KCNH4Q9UQ05 1017 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 IQGAP2Q13576 1575 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 PIK3R1P27986 724 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 HARS2P49590 506 aaKnown RBP17.05■□□□□ 0.32
PTCH1-201ENST00000331920 UTS2BQ765I0 119 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 SYTL1Q8IYJ3 562 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 SH2D3CQ8N5H7 860 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 GPRASP2Q96D09 838 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 SGF29Q96ES7 293 aa17.05■□□□□ 0.32
PTCH1-201ENST00000331920 ZCCHC18P0CG32 403 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 DCAF6Q58WW2 860 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 ARHGEF26Q96DR7 871 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 DAPK2Q9UIK4 370 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 PDHA2P29803 388 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 STAT4Q14765 748 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 ZNF473Q8WTR7 871 aaKnown RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 NEU2Q9Y3R4 380 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 DENND4BO75064 1496 aaPredicted RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 PITPNM2Q9BZ72 1349 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 ASNA1O43681 348 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 SENP2Q9HC62 589 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 CTNNAL1Q9UBT7 734 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 FBXO40Q9UH90 709 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 CPVLQ9H3G5 476 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 HOXC10Q9NYD6 342 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 TRMT6Q9UJA5 497 aaKnown RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 FCER1AP12319 257 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 ORAI2Q96SN7 254 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 CINPQ9BW66 212 aaPredicted RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 PSMC3IPQ9P2W1 217 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms