RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 HNRNPA1P09651 372 aaKnown RBP eCLIP27.65■■■□□ 2.02
TRIM28-204ENST00000594806 TRIM49P0CI25 452 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 TRIM49CP0CI26 452 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 CPB1P15086 417 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 ERCC5P28715 1186 aaPredicted RBP27.65■■■□□ 2.02
TRIM28-204ENST00000594806 ELF1P32519 619 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 MTHFRP42898 656 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 STX17P56962 302 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 TNNC1P63316 161 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 SMARCB1Q12824 385 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 GPR17Q13304 367 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 WDR72Q3MJ13 1102 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 KRT39Q6A163 491 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 RIPOR3Q96MK2 946 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 L1RE1Q9UN81 338 aa27.65■■■□□ 2.02
TRIM28-204ENST00000594806 USP15Q9Y4E8 981 aaPredicted RBP27.65■■■□□ 2.02
TRIM28-204ENST00000594806 SPATA31D3P0C874 917 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 GCLMP48507 274 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 ARPP19P56211 112 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 MYL7Q01449 175 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 PPP3CAQ08209 521 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 SOWAHAQ2M3V2 549 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 ZNF699Q32M78 642 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 CCDC40Q4G0X9 1142 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 ATAT1Q5SQI0 421 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 RARS2Q5T160 578 aaKnown RBP27.64■■■□□ 2.02
TRIM28-204ENST00000594806 SPATA31D4Q6ZUB0 917 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 GPR149Q86SP6 731 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 TCEAL8Q8IYN2 117 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 ACBD6Q9BR61 282 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 SRRTQ9BXP5 876 aaKnown RBP27.64■■■□□ 2.02
TRIM28-204ENST00000594806 IMPG2Q9BZV3 1241 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 PRKAG3Q9UGI9 489 aa27.64■■■□□ 2.02
TRIM28-204ENST00000594806 GABRDO14764 452 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 TACC1O75410 805 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 VNN1O95497 513 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 POU2F2P09086 479 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 P4HA1P13674 534 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 MARSP56192 900 aaKnown RBP27.63■■■□□ 2.01
TRIM28-204ENST00000594806 DPCR1Q3MIW9 517 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 ZNF667Q5HYK9 610 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 PPM1LQ5SGD2 360 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 DCP1BQ8IZD4 617 aaKnown RBP27.63■■■□□ 2.01
TRIM28-204ENST00000594806 ADGRF2Q8IZF7 708 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 CCDC150Q8NCX0 1101 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 MMS19Q96T76 1030 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 HSFX1Q9UBD0 423 aa27.63■■■□□ 2.01
TRIM28-204ENST00000594806 CCDC195A0A1B0GUA6 201 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 HLA-DRAP01903 254 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 C8AP07357 584 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 CCDC192P0DO97 292 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 PCSK1P29120 753 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 PIK3CAP42336 1068 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 MXI1P50539 228 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 TSPY1Q01534 308 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 TCERG1LQ5VWI1 586 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 SASS6Q6UVJ0 657 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 C12orf76Q8N812 135 aaPredicted RBP27.62■■■□□ 2.01
TRIM28-204ENST00000594806 C2orf15Q8WU43 125 aaKnown RBP27.62■■■□□ 2.01
TRIM28-204ENST00000594806 RTP3Q9BQQ7 232 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 PRKD2Q9BZL6 878 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 ZCWPW1Q9H0M4 648 aa27.62■■■□□ 2.01
TRIM28-204ENST00000594806 DDX43Q9NXZ2 648 aaKnown RBP27.62■■■□□ 2.01
TRIM28-204ENST00000594806 TCF20Q9UGU0 1960 aaKnown RBP27.62■■■□□ 2.01
TRIM28-204ENST00000594806 ASS1P00966 412 aaKnown RBP27.61■■■□□ 2.01
TRIM28-204ENST00000594806 WARSP23381 471 aaKnown RBP27.61■■■□□ 2.01
TRIM28-204ENST00000594806 CBX2Q14781 532 aaPredicted RBP27.61■■■□□ 2.01
TRIM28-204ENST00000594806 DCAF17Q5H9S7 520 aaPredicted RBP27.61■■■□□ 2.01
TRIM28-204ENST00000594806 TMC5Q6UXY8 1006 aa27.61■■■□□ 2.01
TRIM28-204ENST00000594806 OR10T2Q8NGX3 314 aa27.61■■■□□ 2.01
TRIM28-204ENST00000594806 SLC35C1Q96A29 364 aa27.61■■■□□ 2.01
TRIM28-204ENST00000594806 FAXDC2Q96IV6 333 aa27.61■■■□□ 2.01
TRIM28-204ENST00000594806 N4BP1O75113 896 aaKnown RBP27.6■■■□□ 2.01
TRIM28-204ENST00000594806 IL9P15248 144 aa27.6■■■□□ 2.01
TRIM28-204ENST00000594806 ADCY1Q08828 1119 aa27.6■■■□□ 2.01
TRIM28-204ENST00000594806 FBXL13Q8NEE6 735 aa27.6■■■□□ 2.01
TRIM28-204ENST00000594806 SLC7A14Q8TBB6 771 aa27.6■■■□□ 2.01
TRIM28-204ENST00000594806 APOL5Q9BWW9 433 aa27.6■■■□□ 2.01
TRIM28-204ENST00000594806 CYP4F11Q9HBI6 524 aa27.6■■■□□ 2.01
TRIM28-204ENST00000594806 NXF1Q9UBU9 619 aaKnown RBP27.6■■■□□ 2.01
TRIM28-204ENST00000594806 PRRG1O14668 218 aa27.59■■■□□ 2.01
TRIM28-204ENST00000594806 PMM2O15305 246 aa27.59■■■□□ 2.01
TRIM28-204ENST00000594806 XYLBO75191 536 aa27.59■■■□□ 2.01
TRIM28-204ENST00000594806 RFPL2O75678 378 aa27.59■■■□□ 2.01
TRIM28-204ENST00000594806 NFE2Q16621 373 aaPredicted RBP27.59■■■□□ 2.01
TRIM28-204ENST00000594806 TPD52L1Q16890 204 aaPredicted RBP27.59■■■□□ 2.01
TRIM28-204ENST00000594806 RNF19BQ6ZMZ0 732 aa27.59■■■□□ 2.01
TRIM28-204ENST00000594806 TAS1R2Q8TE23 839 aa27.59■■■□□ 2.01
TRIM28-204ENST00000594806 MMRN2Q9H8L6 949 aa27.59■■■□□ 2.01
TRIM28-204ENST00000594806 ANO10Q9NW15 660 aa27.59■■■□□ 2.01
TRIM28-204ENST00000594806 COQ4Q9Y3A0 265 aa27.59■■■□□ 2.01
TRIM28-204ENST00000594806 SPTBN5Q9NRC6 3674 aaKnown RBP27.59■■■□□ 2.01
TRIM28-204ENST00000594806 CLSTN1O94985 981 aa27.58■■■□□ 2.01
TRIM28-204ENST00000594806 OR4Q2P0C623 313 aa27.58■■■□□ 2.01
TRIM28-204ENST00000594806 KLHL40Q2TBA0 621 aa27.58■■■□□ 2.01
TRIM28-204ENST00000594806 KBTBD7Q8WVZ9 684 aa27.58■■■□□ 2.01
TRIM28-204ENST00000594806 SMG7Q92540 1137 aaKnown RBP27.58■■■□□ 2.01
TRIM28-204ENST00000594806 ZNF707Q96C28 371 aaPredicted RBP27.58■■■□□ 2.01
TRIM28-204ENST00000594806 MED15Q96RN5 788 aa27.58■■■□□ 2.01
TRIM28-204ENST00000594806 PHF7Q9BWX1 381 aaPredicted RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms