RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 NEU2Q9Y3R4 380 aa13.06□□□□□ -0.32
HDAC7-230ENST00000552960 PLA2G6O60733 806 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 DCTN3O75935 186 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 GNAT1P11488 350 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 SNRNP35Q16560 246 aaKnown RBP13.05□□□□□ -0.32
HDAC7-230ENST00000552960 SNRNP48Q6IEG0 339 aaKnown RBP13.05□□□□□ -0.32
HDAC7-230ENST00000552960 LVRNQ6Q4G3 990 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC7-230ENST00000552960 LRMDAQ9H2I8 198 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 PIDD1Q9HB75 910 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 KIAA1586Q9HCI6 787 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 TCEAL9Q9UHQ7 104 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 ASMTLO95671 621 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 RFC5P40937 340 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 RASSF2P50749 326 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 GPS1Q13098 491 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 FAM182AQ5T1J6 154 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 NLRP9Q7RTR0 991 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 CFAP57Q96MR6 1250 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 SYT15Q9BQS2 421 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 OSBPL8Q9BZF1 889 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 TMEM206Q9H813 350 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 IRAK4Q9NWZ3 460 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 SNCAIPQ9Y6H5 919 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 ADGRA3Q8IWK6 1321 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 KRT4P19013 534 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 PIK3CAP42336 1068 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 NSFP46459 744 aaKnown RBP13.05□□□□□ -0.32
HDAC7-230ENST00000552960 POLE2P56282 527 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 ZNF568Q3ZCX4 644 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 TRABD2AQ86V40 505 aa13.05□□□□□ -0.32
HDAC7-230ENST00000552960 KAT6AQ92794 2004 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 MAP3K13O43283 966 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 ATP5HO75947 161 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 KLC1Q07866 573 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 KHDC1Q4VXA5 237 aaKnown RBP13.04□□□□□ -0.32
HDAC7-230ENST00000552960 FYB2Q5VWT5 728 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 KRT39Q6A163 491 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 SLC30A9Q6PML9 568 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 ZC3H18Q86VM9 953 aaKnown RBP13.04□□□□□ -0.32
HDAC7-230ENST00000552960 UCMAQ8WVF2 138 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 MAIP1Q8WWC4 291 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 SHC3Q92529 594 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 MCUR1Q96AQ8 359 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 SLC7A6OSQ96CW6 309 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-230ENST00000552960 ELP3Q9H9T3 547 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 RNF146Q9NTX7 359 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 ZNF214Q9UL59 606 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-230ENST00000552960 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 STARD13Q9Y3M8 1113 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 AFG3L2Q9Y4W6 797 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 T-ENOLP0DO92 83 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 GNAZP19086 355 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 MAN1A1P33908 653 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 SKIV2L2P42285 1042 aaKnown RBP13.04□□□□□ -0.32
HDAC7-230ENST00000552960 ARSEP51690 589 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 YARSP54577 528 aaKnown RBP13.04□□□□□ -0.32
HDAC7-230ENST00000552960 TAS2R40P59535 323 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 CAV1Q03135 178 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 RCN2Q14257 317 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 NFIL3Q16649 462 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 RNF220Q5VTB9 566 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 OTOAQ7RTW8 1153 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 TEKT4Q8WW24 435 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 POMGNT1Q8WZA1 660 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 MAML1Q92585 1016 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 SBF1O95248 1867 aa13.04□□□□□ -0.32
HDAC7-230ENST00000552960 SNUPNO95149 360 aaKnown RBP13.03□□□□□ -0.32
HDAC7-230ENST00000552960 PECAM1P16284 738 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-230ENST00000552960 PSMC4P43686 418 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 SOX10P56693 466 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 PDIA2Q13087 525 aaKnown RBP13.03□□□□□ -0.32
HDAC7-230ENST00000552960 PPP2R5CQ13362 524 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 RCN1Q15293 331 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 DSTYKQ6XUX3 929 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 SLC9A9Q8IVB4 645 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 REPS2Q8NFH8 660 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 OTUD5Q96G74 571 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 MXRA8Q9BRK3 442 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 PAPOLBQ9NRJ5 636 aaKnown RBP13.03□□□□□ -0.32
HDAC7-230ENST00000552960 RAB20Q9NX57 234 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 DNPEPQ9ULA0 475 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-230ENST00000552960 C2orf71A6NGG8 1288 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 IRF6O14896 467 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 EDF1O60869 148 aaKnown RBP13.03□□□□□ -0.32
HDAC7-230ENST00000552960 ADRA1DP25100 572 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 CPA2P48052 419 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 EAPPQ56P03 285 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-230ENST00000552960 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 PLA2G4FQ68DD2 849 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 FBXL13Q8NEE6 735 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 A6NHS1 94 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 NVLO15381 856 aaKnown RBP13.03□□□□□ -0.32
HDAC7-230ENST00000552960 DHX15O43143 795 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms