RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SLC11A2P49281 568 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 POU6F2P78424 691 aaPredicted RBP6.1□□□□□ -1.43
COPA-203ENST00000481040 ZNF200P98182 395 aaPredicted RBP6.1□□□□□ -1.43
COPA-203ENST00000481040 EIF4HQ15056 248 aaKnown RBP6.1□□□□□ -1.43
COPA-203ENST00000481040 DLGAP5Q15398 846 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 MAPKAPK3Q16644 382 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 PRAMEF14Q5SWL7 426 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 USP17L6PQ6QN14 398 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 BRINP3Q76B58 766 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 ZNF572Q7Z3I7 529 aaPredicted RBP6.1□□□□□ -1.43
COPA-203ENST00000481040 NUP133Q8WUM0 1156 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 AFG1LQ8WV93 481 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 UCMAQ8WVF2 138 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 GFM2Q969S9 779 aaKnown RBP6.1□□□□□ -1.43
COPA-203ENST00000481040 SPSB4Q96A44 273 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 RRP36Q96EU6 259 aaKnown RBP6.1□□□□□ -1.43
COPA-203ENST00000481040 ZSWIM3Q96MP5 696 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 SYT3Q9BQG1 590 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 HEYLQ9NQ87 328 aaPredicted RBP6.1□□□□□ -1.43
COPA-203ENST00000481040 OLA1Q9NTK5 396 aaKnown RBP6.1□□□□□ -1.43
COPA-203ENST00000481040 USP40Q9NVE5 1235 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 MOCS1Q9NZB8 636 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 AASSQ9UDR5 926 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 VWA7Q9Y334 891 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 PLEKHM1Q9Y4G2 1056 aa6.1□□□□□ -1.43
COPA-203ENST00000481040 ATRNL1Q5VV63 1379 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 ORC4O43929 436 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 DNAJB5O75953 348 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 ACTL6BO94805 426 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 GNAI2P04899 355 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 CYP2C8P10632 490 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 RARBP10826 455 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 GYS1P13807 737 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 JUPP14923 745 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 ALOX15P16050 662 aaPredicted RBP6.09□□□□□ -1.43
COPA-203ENST00000481040 EGR1P18146 543 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 BTF3P20290 206 aaKnown RBP6.09□□□□□ -1.43
COPA-203ENST00000481040 COPB2P35606 906 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 KCNQ1P51787 676 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 PNLIPRP1P54315 467 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 UCP3P55916 312 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 VAMP2P63027 116 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 MXRA7P84157 204 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 CUL4BQ13620 913 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 RTP5Q14D33 572 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 SURF1Q15526 300 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 TMTC4Q5T4D3 741 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 KIAA0408Q6ZU52 694 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 NEK10Q6ZWH5 1172 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 STK32CQ86UX6 486 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 TSPYL6Q8N831 410 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 OR1N1Q8NGS0 311 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 ABHD4Q8TB40 342 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 MDM1Q8TC05 714 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 ADAMTS18Q8TE60 1221 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 THAP4Q8WY91 577 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 INTS4Q96HW7 963 aaKnown RBP6.09□□□□□ -1.43
COPA-203ENST00000481040 CLIC6Q96NY7 704 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 CENPOQ9BU64 300 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 DDX23Q9BUQ8 820 aaKnown RBP6.09□□□□□ -1.43
COPA-203ENST00000481040 PACSIN1Q9BY11 444 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 PCDHAC1Q9H158 963 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 PABPC3Q9H361 631 aaKnown RBP6.09□□□□□ -1.43
COPA-203ENST00000481040 SEPSECSQ9HD40 501 aaKnown RBP6.09□□□□□ -1.43
COPA-203ENST00000481040 RLIMQ9NVW2 624 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 JAG2Q9Y219 1238 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 MTO1Q9Y2Z2 717 aaKnown RBP6.09□□□□□ -1.43
COPA-203ENST00000481040 TTLL3Q9Y4R7 772 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 HS3ST4Q9Y661 456 aa6.09□□□□□ -1.43
COPA-203ENST00000481040 F5H0A9 414 aaPredicted RBP6.08□□□□□ -1.44
COPA-203ENST00000481040 MYO1CO00159 1063 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 ABLIM1O14639 778 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 MTSS1O43312 755 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 TMCC2O75069 709 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 SLC43A1O75387 559 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 KNG1P01042 644 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 CHGBP05060 677 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 GRPP07492 148 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 RAP2AP10114 183 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 NCAM1P13591 858 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 FBLN1P23142 703 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 RPS6KB1P23443 525 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 KIR2DL3P43628 341 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 PRKAA2P54646 552 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 ITGA1P56199 1179 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 DCAF7P61962 342 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 YBX1P67809 324 aaKnown RBP6.08□□□□□ -1.44
COPA-203ENST00000481040 UBE3AQ05086 875 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 DUSP2Q05923 314 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 ZNF124Q15973 351 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 WDR45BQ5MNZ6 344 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 AFMIDQ63HM1 303 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 CRTC1Q6UUV9 634 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 ATG4DQ86TL0 474 aaPredicted RBP6.08□□□□□ -1.44
COPA-203ENST00000481040 PLA2G15Q8NCC3 412 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 HVCN1Q96D96 273 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 COG8Q96MW5 612 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 WRNIP1Q96S55 665 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 MYOCQ99972 504 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 PREBQ9HCU5 417 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms