RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TMC5Q6UXY8 1006 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 SV2AQ7L0J3 742 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 LIMS2Q7Z4I7 341 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 FRMD5Q7Z6J6 570 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 TCEAL8Q8IYN2 117 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 PDCL2Q8N4E4 241 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 C12orf76Q8N812 135 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-206ENST00000439717 TAF4BQ92750 862 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 EEF2KMTQ96G04 330 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 DUSP9Q99956 384 aaKnown RBP12.69□□□□□ -0.38
HSPG2-206ENST00000439717 APOL5Q9BWW9 433 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 XYLT2Q9H1B5 865 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 TMEM8AQ9HCN3 771 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 ARMCX3Q9UH62 379 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-206ENST00000439717 AFF4Q9UHB7 1163 aaKnown RBP12.69□□□□□ -0.38
HSPG2-206ENST00000439717 DACH1Q9UI36 760 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 RWDD2AQ9UIY3 292 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 L1RE1Q9UN81 338 aa12.69□□□□□ -0.38
HSPG2-206ENST00000439717 GABRDO14764 452 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 RFPL2O75678 378 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 VNN1O95497 513 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 GNA14O95837 355 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 TRIM49P0CI25 452 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 TRIM49CP0CI26 452 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 NLRP12P59046 1061 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 TNNC1P63316 161 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 MYL7Q01449 175 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 PPP3CAQ08209 521 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 GPR17Q13304 367 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 SOWAHAQ2M3V2 549 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 SGSM1Q2NKQ1 1148 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 ZNF699Q32M78 642 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 WDR72Q3MJ13 1102 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 CT47A1Q5JQC4 288 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-206ENST00000439717 RBM43Q6ZSC3 357 aaKnown RBP12.68□□□□□ -0.38
HSPG2-206ENST00000439717 ADGRF2Q8IZF7 708 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 OR10T2Q8NGX3 314 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 ADAMTS19Q8TE59 1207 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 RTP3Q9BQQ7 232 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 ACBD6Q9BR61 282 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 PHF7Q9BWX1 381 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-206ENST00000439717 PRKD2Q9BZL6 878 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 ZCWPW1Q9H0M4 648 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 HSFX1Q9UBD0 423 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 BRWD1Q9NSI6 2320 aa12.68□□□□□ -0.38
HSPG2-206ENST00000439717 TSC2P49815 1807 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 MTCL1Q9Y4B5 1905 aaKnown RBP12.67□□□□□ -0.38
HSPG2-206ENST00000439717 XYLBO75191 536 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 TACC1O75410 805 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 P4HA1P13674 534 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 PIK3CAP42336 1068 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 GCLMP48507 274 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 STX17P56962 302 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 TSPY1Q01534 308 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 ADCY1Q08828 1119 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 CCDC183Q5T5S1 534 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 KRT39Q6A163 491 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 RNF19BQ6ZMZ0 732 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 ADHFE1Q8IWW8 467 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 DCP1BQ8IZD4 617 aaKnown RBP12.67□□□□□ -0.38
HSPG2-206ENST00000439717 SLC7A14Q8TBB6 771 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 C2orf15Q8WU43 125 aaKnown RBP12.67□□□□□ -0.38
HSPG2-206ENST00000439717 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
HSPG2-206ENST00000439717 ZNF707Q96C28 371 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-206ENST00000439717 MMS19Q96T76 1030 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 UHRF1Q96T88 793 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-206ENST00000439717 CYP4F11Q9HBI6 524 aa12.67□□□□□ -0.38
HSPG2-206ENST00000439717 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
HSPG2-206ENST00000439717 MTMR11A4FU01 709 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 PRRG1O14668 218 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 SEC24AO95486 1093 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 ASS1P00966 412 aaKnown RBP12.66□□□□□ -0.38
HSPG2-206ENST00000439717 HLA-DRAP01903 254 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 OR4Q2P0C623 313 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 PTMSP20962 102 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 WARSP23381 471 aaKnown RBP12.66□□□□□ -0.38
HSPG2-206ENST00000439717 ERCC5P28715 1186 aaPredicted RBP12.66□□□□□ -0.38
HSPG2-206ENST00000439717 PCSK1P29120 753 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 MXI1P50539 228 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 MARSP56192 900 aaKnown RBP12.66□□□□□ -0.38
HSPG2-206ENST00000439717 DPCR1Q3MIW9 517 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 DCAF17Q5H9S7 520 aaPredicted RBP12.66□□□□□ -0.38
HSPG2-206ENST00000439717 ZNF667Q5HYK9 610 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 TCERG1LQ5VWI1 586 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 CCDC150Q8NCX0 1101 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 TAS1R2Q8TE23 839 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 FAXDC2Q96IV6 333 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 TMEM209Q96SK2 561 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 SRRTQ9BXP5 876 aaKnown RBP12.66□□□□□ -0.38
HSPG2-206ENST00000439717 IMPG2Q9BZV3 1241 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 SNX25Q9H3E2 840 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 PIDD1Q9HB75 910 aa12.66□□□□□ -0.38
HSPG2-206ENST00000439717 WDR6Q9NNW5 1121 aaKnown RBP12.66□□□□□ -0.38
HSPG2-206ENST00000439717 NXF1Q9UBU9 619 aaKnown RBP12.66□□□□□ -0.38
HSPG2-206ENST00000439717 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 PMM2O15305 246 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 VNN2O95498 520 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 LRG1P02750 347 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 WEE2P0C1S8 567 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms