RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 DGKIO75912 1065 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 HAUS5O94927 633 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 ICAM1P05362 532 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 IL1R1P14778 569 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 RFC1P35251 1148 aaPredicted RBP9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 MAPK7Q13164 816 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 NT5DC1Q5TFE4 455 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 PDZD8Q8NEN9 1154 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 DDX27Q96GQ7 796 aaKnown RBP9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 UBP1Q9NZI7 540 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 REXO2Q9Y3B8 237 aaKnown RBP9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 KIAA1551Q9HCM1 1747 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 ART3Q13508 389 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 DHX34Q14147 1143 aaKnown RBP9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 C1orf146Q5VVC0 180 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 ISLR2Q6UXK2 745 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 SPATA21Q7Z572 469 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 RSPH3Q86UC2 560 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 EXOC8Q8IYI6 725 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 AFAP1L2Q8N4X5 818 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 BEST2Q8NFU1 509 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 OR6J1Q8NGC5 347 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 RAPGEF5Q92565 580 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 ZBTB10Q96DT7 871 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 FAM167AQ96KS9 214 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 FSD1LQ9BXM9 530 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 ZC3H7BQ9UGR2 993 aaKnown RBP9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 LRFN2Q9ULH4 789 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 PRG3Q9Y2Y8 225 aaPredicted RBP9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 UBA6A0AVT1 1052 aaPredicted RBP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 MEIS2O14770 477 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 CXCL8P10145 99 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 RAD23BP54727 409 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 SURF1Q15526 300 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 FASTKD1Q53R41 847 aaKnown RBP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 DACT2Q5SW24 774 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 LONP2Q86WA8 852 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 ATP11CQ8NB49 1132 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 COPS5Q92905 334 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 ZSWIM1Q9BR11 485 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 TXLNGQ9NUQ3 528 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 FOXO6A8MYZ6 492 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 PPP1R11O60927 126 aaPredicted RBP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 KRT38O76015 456 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 MT-CO1P00395 513 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 TMEM132DQ14C87 1099 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 PTGISQ16647 500 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 MIIPQ5JXC2 388 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 AMIGO3Q86WK7 504 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 FAM131BQ86XD5 332 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 WDR75Q8IWA0 830 aaKnown RBP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 MYCBPAPQ8TBZ2 947 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 SLC26A7Q8TE54 656 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 PABPC5Q96DU9 382 aaKnown RBP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 HPDLQ96IR7 371 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 FGD4Q96M96 766 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 MED15Q96RN5 788 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 ZFATQ9P243 1243 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 CTNNAL1Q9UBT7 734 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 CHUKO15111 745 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 ZNF286BP0CG31 522 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 HSPA9P38646 679 aaKnown RBP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 FBXL16Q8N461 479 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 MTMR9Q96QG7 549 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 BEGAINQ9BUH8 593 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 TRAIPQ9BWF2 469 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 UVRAGQ9P2Y5 699 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 STRIP2Q9ULQ0 834 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 PFASO15067 1338 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 A0A087WZ62 844 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 CDH16O75309 829 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 ENDOD1O94919 500 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 KRT4P19013 534 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 BMPR2Q13873 1038 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 RABGAP1LQ5R372 815 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 C11orf63Q6NUN7 778 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 LVRNQ6Q4G3 990 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 RGS9BPQ6ZS82 235 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 IFNEQ86WN2 208 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 APOBEC3FQ8IUX4 373 aaKnown RBP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 FEZF2Q8TBJ5 459 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 KAT2BQ92831 832 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 UPF1Q92900 1129 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 DNAJC19Q96DA6 116 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 FDXACB1Q9BRP7 624 aaPredicted RBP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 WDR18Q9BV38 432 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 ACTR5Q9H9F9 607 aaPredicted RBP9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 ANGPTL3Q9Y5C1 460 aa9.56□□□□□ -0.88
SMARCA1-202ENST00000371122 ACAT1P24752 427 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 TARSP26639 723 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 ABCG1P45844 678 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 BACE1P56817 501 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CUL2Q13617 745 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 LAYNQ6UX15 382 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 GABPB2Q8TAK5 448 aaPredicted RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 ADAM32Q8TC27 787 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 MYCBPQ99417 103 aaPredicted RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 GCOM2Q9BZD3 368 aaPredicted RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CDC42EP4Q9H3Q1 356 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CHST7Q9NS84 486 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms