RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TTLL4Q14679 1199 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 AENQ8WTP8 325 aaKnown RBP17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 TRIM49D1C9J1S8 452 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 FOXN3O00409 490 aaPredicted RBP17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 GLI1P08151 1106 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 HLA-DPA1P20036 260 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 IFNA8P32881 189 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 SULT1E1P49888 294 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 CENPCQ03188 943 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 TTI2Q6NXR4 508 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 LMCD1Q9NZU5 365 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 HEY2Q9UBP5 337 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 PON1P27169 355 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 GEMIN4P57678 1058 aaKnown RBP17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 C2CD6Q53TS8 623 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 SLC10A4Q96EP9 437 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 TMEM8AQ9HCN3 771 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 MAD2L2Q9UI95 211 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 HSD17B4P51659 736 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 GRB10Q13322 594 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 XKR3Q5GH77 459 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 LAYNQ6UX15 382 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 RPAP3Q9H6T3 665 aaPredicted RBP17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 HERC5Q9UII4 1024 aaKnown RBP17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 ZSCAN9O15535 394 aaPredicted RBP17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 ZC3H12BQ5HYM0 836 aaKnown RBP17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 GPAT2Q6NUI2 795 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 C16orf89Q6UX73 402 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 OR9Q1Q8NGQ5 310 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 TIPINQ9BVW5 301 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 PLEKHA5Q9HAU0 1116 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 PAK5Q9P286 719 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 PRR12Q9ULL5 1215 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 EIF3DO15371 548 aaKnown RBP eCLIP17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 CLPTM1O96005 669 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 SERPINB1P30740 379 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 FNTAP49354 379 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 SERPINB8P50452 374 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 CDK17Q00537 523 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 NFIXQ14938 502 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 SGSM1Q2NKQ1 1148 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 BTNL9Q6UXG8 535 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 C16orf86Q6ZW13 317 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 CCDC80Q76M96 950 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 NLRP9Q7RTR0 991 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 CLEC4FQ8N1N0 589 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 INPP5DQ92835 1189 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 PTPRN2Q92932 1015 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 EPAS1Q99814 870 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 KCND2Q9NZV8 630 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 F8W8V4 182 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 KIAA0391O15091 583 aaKnown RBP17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 HSPA13P48723 471 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 KCNMA1Q12791 1236 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 BAATQ14032 418 aaPredicted RBP17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 DNAAF5Q86Y56 855 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 SEPT12Q8IYM1 358 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 BEGAINQ9BUH8 593 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 ARHGAP20Q9P2F6 1191 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 TEKT2Q9UIF3 430 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 GTF3C4Q9UKN8 822 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 GRID1Q9ULK0 1009 aa17.19■□□□□ 0.34
SH3RF1-201ENST00000284637 H0Y626 953 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 TRIM16O95361 564 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 MYL2P10916 166 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 GTF2H1P32780 548 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 DALRD3Q5D0E6 543 aaKnown RBP17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 TTC39BQ5VTQ0 682 aaPredicted RBP17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 USP31Q70CQ4 1352 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 TRAPPC3O43617 180 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 ZNF189O75820 626 aaPredicted RBP17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 NPEPPSP55786 919 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 BTBD8Q5XKL5 378 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 PPHLN1Q8NEY8 458 aaKnown RBP17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 FEZF2Q8TBJ5 459 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 PJA2O43164 708 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 SPAG6O75602 509 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 RFC5P40937 340 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 KRT33BQ14525 404 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 CYP4A22Q5TCH4 519 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 SNX30Q5VWJ9 437 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 PPIL6Q8IXY8 311 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 SLC8A2Q9UPR5 921 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 PXDNLA1KZ92 1463 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 ZBTB39O15060 712 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 TFRCP02786 760 aaKnown RBP17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 ZNF235Q14590 738 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 Q4G0T1 1027 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 FAXCQ5TGI0 409 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 CDKAL1Q5VV42 579 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 ELMO2Q96JJ3 720 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 IL1RL2Q9HB29 575 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 AGPAT3Q9NRZ7 376 aa17.18■□□□□ 0.34
SH3RF1-201ENST00000284637 PDGFRBP09619 1106 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 CYP11B2P19099 503 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 SPRP35270 261 aaPredicted RBP17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 ALDH5A1P51649 535 aaPredicted RBP17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 STK32AQ8WU08 396 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms