RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 CCT8L2Q96SF2 557 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 SYT17Q9BSW7 474 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 FAM129AQ9BZQ8 928 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 FZD8Q9H461 694 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 ASIC3Q9UHC3 531 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 SRRM3A6NNA2 597 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 E7EVH7 732 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 ACKR2O00590 384 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 TXNP10599 105 aaKnown RBP19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 TCF4P15884 667 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 SSR1P43307 286 aaKnown RBP19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 CLCN3P51790 818 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 TRPC3Q13507 836 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 SURF1Q15526 300 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 TRIP13Q15645 432 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 GPAT2Q6NUI2 795 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 EFCAB12Q6NXP0 572 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 RHBDF2Q6PJF5 856 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 SCARA5Q6ZMJ2 495 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 CCDC25Q86WR0 208 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 ZNF473Q8WTR7 871 aaKnown RBP19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 FAM118BQ9BPY3 351 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 XYLT2Q9H1B5 865 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 MINDY3Q9H8M7 445 aa19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 FEZ2Q9UHY8 353 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-208ENST00000548436 TCRBV5S1A1TA0A578 114 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 TLDC2A0PJX2 215 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 TMEM191CA6NGB0 347 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 INO80B-WBP1J3KQ70 363 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 TMEM191BP0C7N4 346 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 MAN1A1P33908 653 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 ZNF252P-AS1Q0IIN9 211 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 BYSLQ13895 437 aaKnown RBP19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 ZNF568Q3ZCX4 644 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 ATP13A4Q4VNC1 1196 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 WDTC1Q8N5D0 677 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 EXD1Q8NHP7 514 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 TFAP2BQ92481 460 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 PGM2Q96G03 612 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 OSBPL8Q9BZF1 889 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 INO80BQ9C086 356 aaPredicted RBP19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 SMARCAD1Q9H4L7 1026 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 FAM169AQ9Y6X4 670 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 SMIM23A6NLE4 172 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 IQCF3P0C7M6 154 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 ITIH2P19823 946 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 ASPAP45381 313 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 ZNF699Q32M78 642 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 SYDE1Q6ZW31 735 aaPredicted RBP19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 TMEM192Q8IY95 271 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 ATL2Q8NHH9 583 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 GRK7Q8WTQ7 553 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 SNF8Q96H20 258 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 CCDC114Q96M63 670 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 RNPEPQ9H4A4 650 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 KLHL11Q9NVR0 708 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 IP6K2Q9UHH9 426 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 NEU2Q9Y3R4 380 aa19.66■□□□□ 0.74
PRPF40B-208ENST00000548436 PLXNA1Q9UIW2 1896 aa19.65■□□□□ 0.74
PRPF40B-208ENST00000548436 LSM8O95777 96 aaKnown RBP19.65■□□□□ 0.74
PRPF40B-208ENST00000548436 FAM107AO95990 144 aa19.65■□□□□ 0.74
PRPF40B-208ENST00000548436 OSBPP22059 807 aa19.65■□□□□ 0.74
PRPF40B-208ENST00000548436 CHKAP35790 457 aa19.65■□□□□ 0.74
PRPF40B-208ENST00000548436 MBTD1Q05BQ5 628 aa19.65■□□□□ 0.74
PRPF40B-208ENST00000548436 TMEM130Q8N3G9 435 aa19.65■□□□□ 0.74
PRPF40B-208ENST00000548436 EPS8L3Q8TE67 593 aaKnown RBP19.65■□□□□ 0.74
PRPF40B-208ENST00000548436 JPH2Q9BR39 696 aaPredicted RBP19.65■□□□□ 0.74
PRPF40B-208ENST00000548436 TRAPPC3O43617 180 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 HBP1O60381 514 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 B4GALT4O60513 344 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 CALB1P05937 261 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 PAEPP09466 180 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 SLC26A2P50443 739 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 IFI35P80217 286 aaPredicted RBP19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 OGDHQ02218 1023 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 ADCY2Q08462 1091 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 TFDP1Q14186 410 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 CCNG2Q16589 344 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 MDM1Q8TC05 714 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 RAPGEF5Q92565 580 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 MCEEQ96PE7 176 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 DDX23Q9BUQ8 820 aaKnown RBP19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 TMEM109Q9BVC6 243 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 CDC42EP4Q9H3Q1 356 aaKnown RBP19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 POLIQ9UNA4 740 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 ZSWIM8A7E2V4 1837 aa19.64■□□□□ 0.74
PRPF40B-208ENST00000548436 GAS8O95995 478 aa19.64■□□□□ 0.73
PRPF40B-208ENST00000548436 ITGA8P53708 1063 aa19.64■□□□□ 0.73
PRPF40B-208ENST00000548436 TMEM35BQ8NCS4 154 aa19.64■□□□□ 0.73
PRPF40B-208ENST00000548436 CDT1Q9H211 546 aa19.64■□□□□ 0.73
PRPF40B-208ENST00000548436 MROH8Q9H579 483 aa19.64■□□□□ 0.73
PRPF40B-208ENST00000548436 HOMER3Q9NSC5 361 aa19.64■□□□□ 0.73
PRPF40B-208ENST00000548436 GMNCA6NCL1 334 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 F8VP50 259 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 PI4K2BG5E9Z4 385 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 RGS16O15492 202 aaPredicted RBP19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 TNNC2P02585 160 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 CXCL8P10145 99 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 CDH5P33151 784 aaPredicted RBP19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 SLCO1A2P46721 670 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms