RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TSSK1BQ9BXA7 367 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 VCX3BQ9H321 246 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 MANSC1Q9H8J5 431 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 VCX3AQ9NNX9 186 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 CHCHD3Q9NX63 227 aaKnown RBP14.73□□□□□ -0.05
VPS52-212ENST00000445902 PLSCR1O15162 318 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 ANPEPP15144 967 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 RFX1P22670 979 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 SSTR1P30872 391 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 MXI1P50539 228 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 DSG1Q02413 1049 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 MTMR2Q13614 643 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 EBF3Q9H4W6 596 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 ZNF148Q9UQR1 794 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 RPS6KL1Q9Y6S9 549 aa14.73□□□□□ -0.05
VPS52-212ENST00000445902 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.72□□□□□ -0.05
VPS52-212ENST00000445902 F5H6K3 240 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 HNRNPCL1O60812 293 aaKnown RBP14.72□□□□□ -0.05
VPS52-212ENST00000445902 ABHD2P08910 425 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 KLRC2P26717 231 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 PSMC4P43686 418 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 ARSEP51690 589 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 TAS2R40P59535 323 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 KDSRQ06136 332 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 GPATCH4Q5T3I0 446 aaKnown RBP14.72□□□□□ -0.05
VPS52-212ENST00000445902 ECSITQ9BQ95 431 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 NMUR2Q9GZQ4 415 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 ZWILCHQ9H900 591 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 GALNT8Q9NY28 637 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 PSMC3IPQ9P2W1 217 aaPredicted RBP14.72□□□□□ -0.05
VPS52-212ENST00000445902 DNPEPQ9ULA0 475 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 ATRNL1Q5VV63 1379 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 FAM237BA0A1B0GVD1 139 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 MYL2P10916 166 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 ADSSP30520 456 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 INHBCP55103 352 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 TFDP1Q14186 410 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 Q4G0T1 1027 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 ATP13A4Q4VNC1 1196 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 SYDE2Q5VT97 1194 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 RIPOR1Q6ZS17 1223 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 KLHL23Q8NBE8 558 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 BBOF1Q8ND07 529 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 CRYGNQ8WXF5 182 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 TTC17Q96AE7 1141 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 NMD3Q96D46 503 aaKnown RBP14.72□□□□□ -0.05
VPS52-212ENST00000445902 POLR3CQ9BUI4 534 aaPredicted RBP14.72□□□□□ -0.05
VPS52-212ENST00000445902 OSBPL8Q9BZF1 889 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 KCNK13Q9HB14 408 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 DDX4Q9NQI0 724 aaKnown RBP14.72□□□□□ -0.05
VPS52-212ENST00000445902 RHBDL2Q9NX52 303 aa14.72□□□□□ -0.05
VPS52-212ENST00000445902 MYH9P35579 1960 aaKnown RBP14.71□□□□□ -0.05
VPS52-212ENST00000445902 IGKV6D-41A0A0C4DH26 115 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 FCHO1O14526 889 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 OR6B1O95007 311 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 IFNB1P01574 187 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 ATF7P17544 494 aaPredicted RBP14.71□□□□□ -0.05
VPS52-212ENST00000445902 ARL4CP56559 192 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 CDK16Q00536 496 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 DEUP1Q05D60 604 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 KLF1Q13351 362 aaPredicted RBP14.71□□□□□ -0.05
VPS52-212ENST00000445902 ACAD10Q6JQN1 1059 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 CLEC4GQ6UXB4 293 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 RAPH1Q70E73 1250 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 SKA1Q96BD8 255 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 TTC25Q96NG3 672 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 ANGPTL2Q9UKU9 493 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 PPM1HQ9ULR3 514 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 SPATA31A5Q5VU36 1347 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 SPATA31A6Q5VVP1 1343 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 SPATA31A7Q8IWB4 1347 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 HNRNPRO43390 633 aaKnown RBP14.71□□□□□ -0.05
VPS52-212ENST00000445902 SLC26A4O43511 780 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 RARBP10826 455 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 ADRA2BP18089 450 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 BGNP21810 368 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 USP46P62068 366 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 CDC16Q13042 620 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 MYBPC3Q14896 1274 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 NFIL3Q16649 462 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 STXBP4Q6ZWJ1 553 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 FAM20AQ96MK3 541 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 PANX3Q96QZ0 392 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 SETDB2Q96T68 719 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 HSD17B14Q9BPX1 270 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 CENPKQ9BS16 269 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 THTPAQ9BU02 230 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 TOPORSQ9NS56 1045 aaPredicted RBP14.71□□□□□ -0.05
VPS52-212ENST00000445902 NDE1Q9NXR1 346 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 ABCA3Q99758 1704 aa14.71□□□□□ -0.05
VPS52-212ENST00000445902 CDK7P50613 346 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 CENPCQ03188 943 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 CCNG2Q16589 344 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 GSTA3Q16772 222 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 PABPC1LQ4VXU2 614 aaKnown RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 FAM182AQ5T1J6 154 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 ZNF276Q8N554 614 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 ACSF2Q96CM8 615 aaPredicted RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 DTNBP1Q96EV8 351 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 DNAJC1Q96KC8 554 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms