RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PHLDB2Q86SQ0 1253 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 RHOT1Q8IXI2 618 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 KATNAL2Q8IYT4 538 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 OR2W6PQ8NHA6 318 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 ART4Q93070 314 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 ANKRD36BP1Q96IX9 119 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 ZNF668Q96K58 619 aaPredicted RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 HERPUD2Q9BSE4 406 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 C16orf70Q9BSU1 422 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 PABPC3Q9H361 631 aaKnown RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 MORF4L1Q9UBU8 362 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 ATP8A1Q9Y2Q0 1164 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 PASKQ96RG2 1323 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 IQCA1LA6NCM1 817 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 TMEM191CA6NGB0 347 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 BTBD19C9JJ37 291 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 EIF3HO15372 352 aaKnown RBP eCLIP9.61□□□□□ -0.87
TDP1-202ENST00000393452 MEFVO15553 781 aaPredicted RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 ECEL1O95672 775 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 CALB1P05937 261 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 CXCL8P10145 99 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 MCF2P10911 925 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 CETPP11597 493 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 NR1D1P20393 614 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 SSTR3P32745 418 aaPredicted RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 KCNJ1P48048 391 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 EIF3BP55884 814 aaKnown RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 TAS2R40P59535 323 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 PNMA8AQ86V59 439 aaPredicted RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 TMEM192Q8IY95 271 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 TMEM35BQ8NCS4 154 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 CXorf38Q8TB03 319 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 TFAP2BQ92481 460 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 BCO2Q9BYV7 579 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 RPF1Q9H9Y2 349 aaKnown RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 LCMT1Q9UIC8 334 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 SIX4Q9UIU6 781 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 CITO14578 2027 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 O00370 1275 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 TP73O15350 636 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 PPFIA4O75335 1185 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 SNAI1O95863 264 aaPredicted RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 WEE2P0C1S8 567 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 HOXD8P13378 290 aaPredicted RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 CD58P19256 250 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 BRD2P25440 801 aaKnown RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 GCLCP48506 637 aaPredicted RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 PMS2P54278 862 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 OSTNP61366 133 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 YWHAEP62258 255 aaKnown RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 RPL7AP62424 266 aaKnown RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 DNAJC21Q5F1R6 531 aaKnown RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 AGBL2Q5U5Z8 902 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 CDR2LQ86X02 465 aaPredicted RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 WDTC1Q8N5D0 677 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 EXD1Q8NHP7 514 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 AFG1LQ8WV93 481 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 DCLK3Q9C098 648 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 CWC15Q9P013 229 aaKnown RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 WHRNQ9P202 907 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 IP6K2Q9UHH9 426 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 A0A087WZ62 844 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 IVDP26440 423 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 GTF2A2P52657 109 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 GNGT1P63211 74 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 IGBP1P78318 339 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 TNFAIP2Q03169 654 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 ZNF252P-AS1Q0IIN9 211 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 PPP1R15BQ5SWA1 713 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 LRRC38Q5VT99 294 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 DAB2IPQ5VWQ8 1189 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 ANKRD23Q86SG2 305 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 C1orf127Q8N9H9 656 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 C1orf54Q8WWF1 131 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 BRI3BPQ8WY22 251 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 FDXACB1Q9BRP7 624 aaPredicted RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 LHX5Q9H2C1 402 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 PDZD7Q9H5P4 517 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 ASB7Q9H672 318 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 VRTNQ9H8Y1 702 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 CHST7Q9NS84 486 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 HOMER3Q9NSC5 361 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 MTRF1LQ9UGC7 380 aaKnown RBP9.6□□□□□ -0.87
TDP1-202ENST00000393452 PTPN22Q9Y2R2 807 aa9.6□□□□□ -0.87
TDP1-202ENST00000393452 CCL15-CCL14A0A0B4J2E2 113 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 LACTBL1A8MY62 500 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ZEB2O60315 1214 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 NFICP08651 508 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 STAG3L1P0CL83 205 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 RALAP11233 206 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ADCYAP1R1P41586 468 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 TAP1Q03518 808 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 PTK6Q13882 451 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 CCNG2Q16589 344 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 CCL15Q16663 113 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ZNF394Q53GI3 561 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 ZNF667Q5HYK9 610 aa9.59□□□□□ -0.87
TDP1-202ENST00000393452 FOXR1Q6PIV2 292 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms