RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 KRT10P13645 584 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 BTNL9Q6UXG8 535 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 APTXQ7Z2E3 356 aaKnown RBP16.86■□□□□ 0.29
NPHP3-201ENST00000337331 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 TPCN2Q8NHX9 752 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 SPATA17Q96L03 361 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 SERPINB12Q96P63 405 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 WRNIP1Q96S55 665 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 ASCC2Q9H1I8 757 aaPredicted RBP16.86■□□□□ 0.29
NPHP3-201ENST00000337331 DENND2DQ9H6A0 471 aaPredicted RBP16.86■□□□□ 0.29
NPHP3-201ENST00000337331 PCMTD2Q9NV79 361 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 RBAKQ9NYW8 714 aaPredicted RBP16.86■□□□□ 0.29
NPHP3-201ENST00000337331 SLC9A2Q9UBY0 812 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 MTTPP55157 894 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 ZC2HC1CQ53FD0 456 aaPredicted RBP16.86■□□□□ 0.29
NPHP3-201ENST00000337331 SPOUT1Q5T280 376 aaKnown RBP16.86■□□□□ 0.29
NPHP3-201ENST00000337331 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 PIGWQ7Z7B1 504 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 KIAA2013Q8IYS2 634 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 KLF6Q99612 283 aaPredicted RBP16.86■□□□□ 0.29
NPHP3-201ENST00000337331 BLOC1S6Q9UL45 172 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 PCDHA10Q9Y5I2 948 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 EPHB6O15197 1021 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 APOEP02649 317 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 RARGP13631 454 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 TBXAS1P24557 533 aaPredicted RBP16.86■□□□□ 0.29
NPHP3-201ENST00000337331 ACAP1Q15027 740 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 C16orf86Q6ZW13 317 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 ARMCX2Q7L311 632 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 GALNT4Q8N4A0 578 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 SNF8Q96H20 258 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 TUFT1Q9NNX1 390 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 ARHGEF3Q9NR81 526 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 SALL4Q9UJQ4 1053 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 STRIP2Q9ULQ0 834 aa16.86■□□□□ 0.29
NPHP3-201ENST00000337331 COL3A1P02461 1466 aaPredicted RBP16.86■□□□□ 0.29
NPHP3-201ENST00000337331 TMEM131LA2VDJ0 1609 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 PFDN6O15212 129 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 RGS2P41220 211 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 ZNF662Q6ZS27 426 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 ENOSF1Q7L5Y1 443 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 PATL1Q86TB9 770 aaKnown RBP16.85■□□□□ 0.29
NPHP3-201ENST00000337331 TMEM110Q86TL2 294 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 TMCO5AQ8N6Q1 288 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 ASAP3Q8TDY4 903 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 CNBD2Q96M20 576 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 CDC42EP4Q9H3Q1 356 aaKnown RBP16.85■□□□□ 0.29
NPHP3-201ENST00000337331 AGO2Q9UKV8 859 aaKnown RBP16.85■□□□□ 0.29
NPHP3-201ENST00000337331 TDRKHQ9Y2W6 561 aaKnown RBP16.85■□□□□ 0.29
NPHP3-201ENST00000337331 A6NHS1 94 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 PI4K2BG5E9Z4 385 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 KRT75O95678 551 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 LYNP07948 512 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 NTRK3Q16288 839 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 PDZD8Q8NEN9 1154 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 CTNNAL1Q9UBT7 734 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 HERC5Q9UII4 1024 aaKnown RBP16.85■□□□□ 0.29
NPHP3-201ENST00000337331 PHF2O75151 1096 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 SLC4A1P02730 911 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 ALDH18A1P54886 795 aaKnown RBP16.85■□□□□ 0.29
NPHP3-201ENST00000337331 LVRNQ6Q4G3 990 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 B3GNT6Q6ZMB0 384 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 INPP5DQ92835 1189 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 MAML3Q96JK9 1138 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 INPP4AQ96PE3 977 aaPredicted RBP16.85■□□□□ 0.29
NPHP3-201ENST00000337331 POLR3FQ9H1D9 316 aaPredicted RBP16.85■□□□□ 0.29
NPHP3-201ENST00000337331 JMJD4Q9H9V9 463 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 MARCOQ9UEW3 520 aaPredicted RBP16.85■□□□□ 0.29
NPHP3-201ENST00000337331 DOLKQ9UPQ8 538 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 OVOS2A0A0G2JMS6 1433 aa16.85■□□□□ 0.29
NPHP3-201ENST00000337331 TTC4O95801 387 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
NPHP3-201ENST00000337331 ART3Q13508 389 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 C1orf228Q6PIY5 440 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 MRPL46Q9H2W6 279 aaKnown RBP16.84■□□□□ 0.29
NPHP3-201ENST00000337331 ASNSD1Q9NWL6 643 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 IP6K2Q9UHH9 426 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 STRNO43815 780 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 KRT7P08729 469 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 NFX1Q12986 1120 aaKnown RBP16.84■□□□□ 0.29
NPHP3-201ENST00000337331 ITPK1Q13572 414 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 KLHL38Q2WGJ6 581 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 MRPL1Q9BYD6 325 aaKnown RBP16.84■□□□□ 0.29
NPHP3-201ENST00000337331 GOLGA8QA0A0J9YX86 632 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 GOLGA8OA6NCC3 632 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 TRIM43BA6NCK2 446 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 ANKRD33BA6NCL7 494 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 RSPH10B2B2RC85 870 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 GOLGA8NF8WBI6 632 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 SLC16A3O15427 465 aaKnown RBP16.84■□□□□ 0.29
NPHP3-201ENST00000337331 GGPS1O95749 300 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 RSPH10BP0C881 870 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 ATP1A4Q13733 1029 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 AUHQ13825 339 aaKnown RBP16.84■□□□□ 0.29
NPHP3-201ENST00000337331 PRR5LQ6MZQ0 368 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 CCT7Q99832 543 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 TSSK1BQ9BXA7 367 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 HSPBP1Q9NZL4 362 aa16.84■□□□□ 0.29
NPHP3-201ENST00000337331 APPL1Q9UKG1 709 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms