RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ZBTB12Q9Y330 459 aaPredicted RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 M0R2N6 131 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 TGFB1I1O43294 461 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 EXTL3O43909 919 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 RBP3P10745 1247 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 PGM1P36871 562 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 FLT3P36888 993 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 BZW1Q7L1Q6 419 aaKnown RBP8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 TEX2Q8IWB9 1127 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 PRELID2Q8N945 189 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 ZNF668Q96K58 619 aaPredicted RBP8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 LBHD1Q9BQE6 289 aaPredicted RBP8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 VCX3AQ9NNX9 186 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 ZNF277Q9NRM2 450 aaPredicted RBP8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 LRRC4BQ9NT99 713 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 KIF1AQ12756 1690 aa8.65□□□□□ -1.03
PRKAB1-207ENST00000542698 PSTPIP1O43586 416 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ZC3H11AO75152 810 aaKnown RBP eCLIP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 GPC4O75487 556 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 PROSCO94903 275 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ATP6V1G2O95670 118 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ICAM1P05362 532 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 CYP3A4P08684 503 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SDC4P31431 198 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 EFNA5P52803 228 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 PPP3CAQ08209 521 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SGSM1Q2NKQ1 1148 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ASTE1Q2TB18 679 aaPredicted RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 RFX8Q6ZV50 586 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SESTD1Q86VW0 696 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 DTX3LQ8TDB6 740 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 KAT5Q92993 513 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 FAM167AQ96KS9 214 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 RANBP17Q9H2T7 1088 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 TLK1Q9UKI8 766 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 FRMPD4Q14CM0 1322 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 RASSF10A6NK89 507 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 APRTP07741 180 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 NUDT17P0C025 328 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SLURP2P0DP57 97 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 MAPTP10636 758 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 TARSP26639 723 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 GTF2H1P32780 548 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 PRKCEQ02156 737 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 KLC1Q07866 573 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 KIF22Q14807 665 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 CRYMQ14894 314 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SUPT20HL1Q3ZLR7 823 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SWT1Q5T5J6 900 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 NOP9Q86U38 636 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 RNF149Q8NC42 400 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ETNPPLQ8TBG4 499 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 MIPOL1Q8TD10 442 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 PARD3BQ8TEW8 1205 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ALG3Q92685 438 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 WRNIP1Q96S55 665 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 HSD17B14Q9BPX1 270 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 NUF2Q9BZD4 464 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 TMEM39BQ9GZU3 492 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ACAD9Q9H845 621 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 RXFP1Q9HBX9 757 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 RAB6BQ9NRW1 208 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 WDR35Q9P2L0 1181 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 PCYOX1Q9UHG3 505 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 HAO1Q9UJM8 370 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 M0QYV0 167 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SNX3O60493 162 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SNHG28P0DPA3 235 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 STAT5BP51692 787 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 GEMIN4P57678 1058 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ZNF200P98182 395 aaPredicted RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 CUL2Q13617 745 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 DBN1Q16643 649 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 GRAMD1BQ3KR37 738 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SYCP2LQ5T4T6 812 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 C1orf228Q6PIY5 440 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ZNF572Q7Z3I7 529 aaPredicted RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 C4orf19Q8IY42 314 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ATXN2LQ8WWM7 1075 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ZKSCAN4Q969J2 545 aaPredicted RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 PPP1R16BQ96T49 567 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 MED10Q9BTT4 135 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 WWP1Q9H0M0 922 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SMYD3Q9H7B4 428 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 TOPORSQ9NS56 1045 aaPredicted RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 G3BP2Q9UN86 482 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 CHMP2BQ9UQN3 213 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 L3MBTL1Q9Y468 752 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 TUBGCP6Q96RT7 1819 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 RGPD2P0DJD1 1756 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 AFF2P51816 1311 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 WEE2P0C1S8 567 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 EPHB1P54762 984 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 IFRD2Q12894 506 aaPredicted RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 AUHQ13825 339 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 BMT2Q1RMZ1 405 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SMTNL2Q2TAL5 461 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 HSP90AA5PQ58FG0 334 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 GPAT2Q6NUI2 795 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms