RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 NOTCH4Q99466 2003 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 SPTLC1O15269 473 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 RFPL2O75678 378 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 OAZ2O95190 189 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 POU2F2P09086 479 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 SPATA31D3P0C874 917 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 ANP32AP39687 249 aaKnown RBP18.76■□□□□ 0.59
USP35-202ENST00000528910 FAM160A1Q05DH4 1040 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 SNW1Q13573 536 aaKnown RBP18.76■□□□□ 0.59
USP35-202ENST00000528910 KCNB1Q14721 858 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 SPATA31D4Q6ZUB0 917 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 RTL10Q7L3V2 364 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 CXorf38Q8TB03 319 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 GOLGA5Q8TBA6 731 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 CCDC34Q96HJ3 373 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 ZNF560Q96MR9 790 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 PDE11AQ9HCR9 933 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 FBXL5Q9UKA1 691 aa18.76■□□□□ 0.59
USP35-202ENST00000528910 WDR27A2RRH5 827 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 GOLGA6L4A6NEF3 574 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 ZNF233A6NK53 670 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 C8AP07357 584 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 HNRNPA1P09651 372 aaKnown RBP eCLIP18.75■□□□□ 0.59
USP35-202ENST00000528910 TAF6P49848 677 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 TFAMQ00059 246 aaKnown RBP18.75■□□□□ 0.59
USP35-202ENST00000528910 YWHAHQ04917 246 aaPredicted RBP18.75■□□□□ 0.59
USP35-202ENST00000528910 SURF1Q15526 300 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 SNRNP35Q16560 246 aaKnown RBP18.75■□□□□ 0.59
USP35-202ENST00000528910 CTXN3Q4LDR2 81 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 LIN9Q5TKA1 542 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 C1orf127Q8N9H9 656 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 XXYLT1Q8NBI6 393 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 CCDC47Q96A33 483 aaKnown RBP18.75■□□□□ 0.59
USP35-202ENST00000528910 OXCT2Q9BYC2 517 aaPredicted RBP18.75■□□□□ 0.59
USP35-202ENST00000528910 KCTD10Q9H3F6 313 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 NR2E1Q9Y466 385 aa18.75■□□□□ 0.59
USP35-202ENST00000528910 PTPRJQ12913 1337 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 CCDC195A0A1B0GUA6 201 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 ARHGEF37A1IGU5 675 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 CLIC2O15247 247 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 ABLIM3O94929 683 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 CYP11A1P05108 521 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 ODC1P11926 461 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 PNPLA4P41247 253 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 DSTYKQ6XUX3 929 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 CCDC149Q6ZUS6 474 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 ZNF461Q8TAF7 563 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 CACTINQ8WUQ7 758 aaKnown RBP18.74■□□□□ 0.59
USP35-202ENST00000528910 SMG7Q92540 1137 aaKnown RBP18.74■□□□□ 0.59
USP35-202ENST00000528910 BORCS6Q96GS4 357 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 RPGRIP1Q96KN7 1286 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 SENP8Q96LD8 212 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 TIGD1Q96MW7 591 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 PRKD2Q9BZL6 878 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 INTS13Q9NVM9 706 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 ITGA11Q9UKX5 1188 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 USTQ9Y2C2 406 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 CLUHO75153 1309 aa18.74■□□□□ 0.59
USP35-202ENST00000528910 PI4K2BG5E9Z4 385 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 CYP2J2P51589 502 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 CYP24A1Q07973 514 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 PSMD6Q15008 389 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 UVSSAQ2YD98 709 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 SV2CQ496J9 727 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 TPGS2Q68CL5 300 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 RNF135Q8IUD6 432 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 WDR49Q8IV35 697 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 SLC9A9Q8IVB4 645 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 LRRC52Q8N7C0 313 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 SLC7A14Q8TBB6 771 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 NOC3LQ8WTT2 800 aaKnown RBP18.73■□□□□ 0.59
USP35-202ENST00000528910 FAM84AQ96KN4 292 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 MTMR12Q9C0I1 747 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 WDR6Q9NNW5 1121 aaKnown RBP18.73■□□□□ 0.59
USP35-202ENST00000528910 CHMP5Q9NZZ3 219 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 SIX4Q9UIU6 781 aa18.73■□□□□ 0.59
USP35-202ENST00000528910 OR6C75A6NL08 312 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 C2CD4DB7Z1M9 353 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 PDXKO00764 312 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 KIF20AO95235 890 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 ITGB3P05106 788 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 TMEM191BP0C7N4 346 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 ATF2P15336 505 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 POLR2BP30876 1174 aaKnown RBP18.72■□□□□ 0.59
USP35-202ENST00000528910 PPM1LQ5SGD2 360 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 OVOS1Q6IE37 1185 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 USP37Q86T82 979 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 TDRD5Q8NAT2 981 aaKnown RBP18.72■□□□□ 0.59
USP35-202ENST00000528910 CGRRF1Q99675 332 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 DMAC2Q9NW81 257 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 DSEQ9UL01 958 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 MAFFQ9ULX9 164 aa18.72■□□□□ 0.59
USP35-202ENST00000528910 TIMM13Q9Y5L4 95 aaPredicted RBP18.72■□□□□ 0.59
USP35-202ENST00000528910 MYO10Q9HD67 2058 aa18.71■□□□□ 0.59
USP35-202ENST00000528910 DCXO43602 365 aa18.71■□□□□ 0.59
USP35-202ENST00000528910 PNOCQ13519 176 aa18.71■□□□□ 0.59
USP35-202ENST00000528910 MYBPC2Q14324 1141 aa18.71■□□□□ 0.59
USP35-202ENST00000528910 NFIL3Q16649 462 aa18.71■□□□□ 0.59
USP35-202ENST00000528910 ELOA2Q8IYF1 753 aaPredicted RBP18.71■□□□□ 0.59
USP35-202ENST00000528910 TCEAL8Q8IYN2 117 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms