RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 THP07101 528 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 SLC44A4Q53GD3 710 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 ZNF761Q86XN6 746 aaPredicted RBP8.84□□□□□ -0.99
NUP54-215ENST00000514313 KBTBD2Q8IY47 623 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 OR56A3Q8NH54 315 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 FBXO34Q9NWN3 711 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 SAGE1Q9NXZ1 904 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 PNPLA7Q6ZV29 1317 aa8.83□□□□□ -1
NUP54-215ENST00000514313 PYCARD-AS1I3L0S3 204 aa8.83□□□□□ -1
NUP54-215ENST00000514313 SKAP2O75563 359 aaPredicted RBP8.83□□□□□ -1
NUP54-215ENST00000514313 CARSP49589 748 aaKnown RBP8.83□□□□□ -1
NUP54-215ENST00000514313 MESP2Q0VG99 397 aa8.83□□□□□ -1
NUP54-215ENST00000514313 GALNT1Q10472 559 aaPredicted RBP8.83□□□□□ -1
NUP54-215ENST00000514313 LMBRD2Q68DH5 695 aaPredicted RBP8.83□□□□□ -1
NUP54-215ENST00000514313 ATG14Q6ZNE5 492 aa8.83□□□□□ -1
NUP54-215ENST00000514313 UNC13DQ70J99 1090 aa8.83□□□□□ -1
NUP54-215ENST00000514313 SHCBP1Q8NEM2 672 aa8.83□□□□□ -1
NUP54-215ENST00000514313 DACT3Q96B18 629 aaPredicted RBP8.83□□□□□ -1
NUP54-215ENST00000514313 NAP1L4Q99733 375 aaKnown RBP8.83□□□□□ -1
NUP54-215ENST00000514313 ISCA1Q9BUE6 129 aa8.83□□□□□ -1
NUP54-215ENST00000514313 EPC1Q9H2F5 836 aa8.83□□□□□ -1
NUP54-215ENST00000514313 GPR35Q9HC97 309 aa8.83□□□□□ -1
NUP54-215ENST00000514313 GTF2A1LQ9UNN4 478 aa8.83□□□□□ -1
NUP54-215ENST00000514313 MAN2B2Q9Y2E5 1009 aa8.83□□□□□ -1
NUP54-215ENST00000514313 SLC4A7Q9Y6M7 1214 aa8.83□□□□□ -1
NUP54-215ENST00000514313 A0A087WWL8 130 aa8.82□□□□□ -1
NUP54-215ENST00000514313 MBD3L4A6NDZ8 208 aaPredicted RBP8.82□□□□□ -1
NUP54-215ENST00000514313 MBD3L3A6NE82 208 aaPredicted RBP8.82□□□□□ -1
NUP54-215ENST00000514313 B5MCH6 92 aa8.82□□□□□ -1
NUP54-215ENST00000514313 THAP12O43422 761 aa8.82□□□□□ -1
NUP54-215ENST00000514313 KRT1P04264 644 aa8.82□□□□□ -1
NUP54-215ENST00000514313 SLC11A2P49281 568 aa8.82□□□□□ -1
NUP54-215ENST00000514313 CLRN1P58418 232 aa8.82□□□□□ -1
NUP54-215ENST00000514313 CRB2Q5IJ48 1285 aa8.82□□□□□ -1
NUP54-215ENST00000514313 BEND5Q7L4P6 421 aa8.82□□□□□ -1
NUP54-215ENST00000514313 XYLT1Q86Y38 959 aa8.82□□□□□ -1
NUP54-215ENST00000514313 PDSS2Q86YH6 399 aa8.82□□□□□ -1
NUP54-215ENST00000514313 FAM9AQ8IZU1 332 aaPredicted RBP8.82□□□□□ -1
NUP54-215ENST00000514313 MPP5Q8N3R9 675 aa8.82□□□□□ -1
NUP54-215ENST00000514313 DNAJC5GQ8N7S2 189 aa8.82□□□□□ -1
NUP54-215ENST00000514313 NLGN4YQ8NFZ3 816 aaPredicted RBP8.82□□□□□ -1
NUP54-215ENST00000514313 TINAGL1Q9GZM7 467 aaPredicted RBP8.82□□□□□ -1
NUP54-215ENST00000514313 AGO3Q9H9G7 860 aaKnown RBP8.82□□□□□ -1
NUP54-215ENST00000514313 ITGB1BP2Q9UKP3 347 aa8.82□□□□□ -1
NUP54-215ENST00000514313 SLC39A10Q9ULF5 831 aa8.82□□□□□ -1
NUP54-215ENST00000514313 AGAP1Q9UPQ3 857 aa8.82□□□□□ -1
NUP54-215ENST00000514313 GPR52Q9Y2T5 361 aa8.82□□□□□ -1
NUP54-215ENST00000514313 PAXBP1Q9Y5B6 917 aa8.82□□□□□ -1
NUP54-215ENST00000514313 TCAF2A6NFQ2 919 aa8.81□□□□□ -1
NUP54-215ENST00000514313 MROH6A6NGR9 719 aa8.81□□□□□ -1
NUP54-215ENST00000514313 RFXAPO00287 272 aa8.81□□□□□ -1
NUP54-215ENST00000514313 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
NUP54-215ENST00000514313 AMHP03971 560 aa8.81□□□□□ -1
NUP54-215ENST00000514313 GRPP07492 148 aa8.81□□□□□ -1
NUP54-215ENST00000514313 ALAS1P13196 640 aa8.81□□□□□ -1
NUP54-215ENST00000514313 KLRC1P26715 233 aa8.81□□□□□ -1
NUP54-215ENST00000514313 CCT5P48643 541 aa8.81□□□□□ -1
NUP54-215ENST00000514313 ZNF135P52742 658 aaPredicted RBP8.81□□□□□ -1
NUP54-215ENST00000514313 UCP3P55916 312 aa8.81□□□□□ -1
NUP54-215ENST00000514313 PRR16Q569H4 304 aa8.81□□□□□ -1
NUP54-215ENST00000514313 DCAF12L1Q5VU92 463 aa8.81□□□□□ -1
NUP54-215ENST00000514313 RRAGBQ5VZM2 374 aa8.81□□□□□ -1
NUP54-215ENST00000514313 CACNA2D3Q8IZS8 1091 aa8.81□□□□□ -1
NUP54-215ENST00000514313 SLC15A4Q8N697 577 aa8.81□□□□□ -1
NUP54-215ENST00000514313 TMIEQ8NEW7 156 aa8.81□□□□□ -1
NUP54-215ENST00000514313 MUL1Q969V5 352 aa8.81□□□□□ -1
NUP54-215ENST00000514313 PPP1R16BQ96T49 567 aa8.81□□□□□ -1
NUP54-215ENST00000514313 TCF25Q9BQ70 676 aa8.81□□□□□ -1
NUP54-215ENST00000514313 STK31Q9BXU1 1019 aa8.81□□□□□ -1
NUP54-215ENST00000514313 CHST8Q9H2A9 424 aa8.81□□□□□ -1
NUP54-215ENST00000514313 A0A1W2PRX2 142 aa8.8□□□□□ -1
NUP54-215ENST00000514313 PMS2P1A4D2B8 440 aa8.8□□□□□ -1
NUP54-215ENST00000514313 CDHR4A6H8M9 788 aa8.8□□□□□ -1
NUP54-215ENST00000514313 GOLGA6L3A6NEY3 463 aa8.8□□□□□ -1
NUP54-215ENST00000514313 CLCA1A8K7I4 914 aa8.8□□□□□ -1
NUP54-215ENST00000514313 M0QYG6 137 aa8.8□□□□□ -1
NUP54-215ENST00000514313 VEGFAP15692 232 aaPredicted RBP8.8□□□□□ -1
NUP54-215ENST00000514313 TAL1P17542 331 aaPredicted RBP8.8□□□□□ -1
NUP54-215ENST00000514313 AFF3P51826 1226 aaKnown RBP8.8□□□□□ -1
NUP54-215ENST00000514313 POU6F2P78424 691 aaPredicted RBP8.8□□□□□ -1
NUP54-215ENST00000514313 ALFQ53S48 1182 aa8.8□□□□□ -1
NUP54-215ENST00000514313 UTP14CQ5TAP6 766 aaKnown RBP8.8□□□□□ -1
NUP54-215ENST00000514313 CATSPERGQ6ZRH7 1159 aa8.8□□□□□ -1
NUP54-215ENST00000514313 RNF44Q7L0R7 432 aa8.8□□□□□ -1
NUP54-215ENST00000514313 GPR135Q8IZ08 494 aa8.8□□□□□ -1
NUP54-215ENST00000514313 PAF1Q8N7H5 531 aa8.8□□□□□ -1
NUP54-215ENST00000514313 TP53I13Q8NBR0 393 aaPredicted RBP8.8□□□□□ -1
NUP54-215ENST00000514313 RMDN3Q96TC7 470 aa8.8□□□□□ -1
NUP54-215ENST00000514313 DPYSL5Q9BPU6 564 aa8.8□□□□□ -1
NUP54-215ENST00000514313 GSTO2Q9H4Y5 243 aa8.8□□□□□ -1
NUP54-215ENST00000514313 OBP2BQ9NPH6 170 aa8.8□□□□□ -1
NUP54-215ENST00000514313 A1CFQ9NQ94 594 aaKnown RBP8.8□□□□□ -1
NUP54-215ENST00000514313 GRHPRQ9UBQ7 328 aa8.8□□□□□ -1
NUP54-215ENST00000514313 PNMA2Q9UL42 364 aa8.8□□□□□ -1
NUP54-215ENST00000514313 SMG5Q9UPR3 1016 aaKnown RBP8.8□□□□□ -1
NUP54-215ENST00000514313 LZTS1Q9Y250 596 aa8.8□□□□□ -1
NUP54-215ENST00000514313 PLEKHM1Q9Y4G2 1056 aa8.8□□□□□ -1
NUP54-215ENST00000514313 B4GALT4O60513 344 aa8.79□□□□□ -1
NUP54-215ENST00000514313 CNOT4O95628 575 aaKnown RBP8.79□□□□□ -1
NUP54-215ENST00000514313 NDST3O95803 873 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms