RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PCGF6Q9BYE7 350 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 TMEM60Q9H2L4 133 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZNF768Q9H5H4 540 aaKnown RBP6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 RSAD1Q9HA92 442 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 SLC45A2Q9UMX9 530 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 AATKQ6ZMQ8 1374 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 CHEK2O96017 543 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 FCER1AP12319 257 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 FGFR4P22455 802 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZNF135P52742 658 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 PTTG1IPP53801 180 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 GBX1Q14549 363 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 GRM3Q14832 879 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 MIIPQ5JXC2 388 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 ARMC6Q6NXE6 501 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 SRGAP1Q7Z6B7 1085 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 CCAR1Q8IX12 1150 aaKnown RBP6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 TMIEQ8NEW7 156 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 DDX17Q92841 729 aaKnown RBP6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 RNF31Q96EP0 1072 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 KLHL32Q96NJ5 620 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 MED15Q96RN5 788 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 LRFN3Q9BTN0 628 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 TEX101Q9BY14 249 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 PIH1D1Q9NWS0 290 aaKnown RBP6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 DDX20Q9UHI6 824 aaKnown RBP6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 USP25Q9UHP3 1055 aa6.13□□□□□ -1.43
HMGB1P38-201ENST00000490557 CFAP69A5D8W1 941 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 MATN4O95460 622 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 CFIP05156 583 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 DDX6P26196 483 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 AGFG1P52594 562 aaKnown RBP6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 CACNB3P54284 484 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 SOX8P57073 446 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 FAM189BP81408 668 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 SLC25A3Q00325 362 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 OCA2Q04671 838 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 EXOSC9Q06265 439 aaKnown RBP6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 RESTQ13127 1097 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 HABP2Q14520 560 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 KIF22Q14807 665 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 PREPLQ4J6C6 727 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 METRNLQ641Q3 311 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 KCNV1Q6PIU1 500 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 DBX2Q6ZNG2 339 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 DGKHQ86XP1 1220 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 PDPRQ8NCN5 879 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 CPEB3Q8NE35 698 aaKnown RBP6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 PLBD2Q8NHP8 589 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZNF483Q8TF39 744 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 SMOQ99835 787 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 CNPPD1Q9BV87 410 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 TLR10Q9BXR5 811 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 SLC2A4RGQ9NR83 387 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 GEMIN8Q9NWZ8 242 aaKnown RBP6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 MAP3K2Q9Y2U5 619 aa6.12□□□□□ -1.43
HMGB1P38-201ENST00000490557 SLFN5Q08AF3 891 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 KIAA0753Q2KHM9 967 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 BEAN1Q3B7T3 259 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 CCDC181Q5TID7 509 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 DARS2Q6PI48 645 aaKnown RBP6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 MAEAQ7L5Y9 396 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 FAM43AQ8N2R8 423 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 TMEM132CQ8N3T6 1108 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 TTC17Q96AE7 1141 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 MYEOVQ96EZ4 313 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZNF747Q9BV97 191 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 ALOXE3Q9BYJ1 711 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 KCNE5Q9UJ90 142 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 FZD1Q9UP38 647 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 NEU2Q9Y3R4 380 aa6.11□□□□□ -1.43
HMGB1P38-201ENST00000490557 M0QYG6 137 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 POLRMTO00411 1230 aaKnown RBP6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 TOR1BO14657 336 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 MATN3O15232 486 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 PHGDHO43175 533 aaKnown RBP6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 MGEA5O60502 916 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 CDKL5O76039 1030 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZNF202O95125 648 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 ABHD16AO95870 558 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 FOSP01100 380 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 MAKP20794 623 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 CXADRP78310 365 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 GUCY1B3Q02153 619 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 CNN3Q15417 329 aaKnown RBP6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 LY6G5CQ5SRR4 150 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 TAPT1Q6NXT6 567 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 LRRC55Q6ZSA7 311 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 COLGALT2Q8IYK4 626 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 CFAP52Q8N1V2 620 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 FAM156AQ8NDB6 213 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 PROKR1Q8TCW9 393 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 NT5C1BQ96P26 610 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 TRIB1Q96RU8 372 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 TINAGL1Q9GZM7 467 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 GPR35Q9HC97 309 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 TPCN1Q9ULQ1 816 aa6.1□□□□□ -1.43
HMGB1P38-201ENST00000490557 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms