RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CCDC89Q8N998 374 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 TMEM161BQ8NDZ6 487 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 ACSF2Q96CM8 615 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 PRMT6Q96LA8 375 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 CCDC77Q9BR77 488 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 OSBPL1AQ9BXW6 950 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 YIPF3Q9GZM5 350 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 MRPL11Q9Y3B7 192 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 ACTL7BQ9Y614 415 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 USH1CQ9Y6N9 552 aa12.44□□□□□ -0.42
PDZRN3-203ENST00000462146 ENO4A6NNW6 628 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 TCP10L2B9ZVM9 353 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 MAPK13O15264 365 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 MAP3K13O43283 966 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 EDF1O60869 148 aaKnown RBP12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 PROSCO94903 275 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 PECAM1P16284 738 aaPredicted RBP12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 QARSP47897 775 aaKnown RBP12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 CCNG1P51959 295 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 GAD2Q05329 585 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 CCNG2Q16589 344 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 TAF1BQ53T94 588 aaPredicted RBP12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 CDAN1Q8IWY9 1227 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 ZCCHC9Q8N567 271 aaKnown RBP12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 TMEM174Q8WUU8 243 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 MAIP1Q8WWC4 291 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 ZNF516Q92618 1163 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 CYP39A1Q9NYL5 469 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 DENND3A2RUS2 1198 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 WDR91A4D1P6 747 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 GOLGA8SH3BPF8 625 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 GOLGA8MH3BSY2 632 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 PDHA1P08559 390 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 CALB2P22676 271 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 CA4P22748 312 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 NPTX2P47972 431 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 PARP6Q2NL67 630 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 RFWD3Q6PCD5 774 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 MON1BQ7L1V2 547 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 MAK16Q9BXY0 300 aaKnown RBP12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 EHMT1Q9H9B1 1298 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 VPS37BQ9H9H4 285 aa12.43□□□□□ -0.42
PDZRN3-203ENST00000462146 RGPD3A6NKT7 1758 aaPredicted RBP12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 RGPD4Q7Z3J3 1758 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 MAGEB2O15479 319 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 ECE2O60344 883 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 NSFP46459 744 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 NOP14P78316 857 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 MRPS9P82933 396 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 CYP24A1Q07973 514 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 SPARCL1Q14515 664 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 PDK4Q16654 411 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 PLEKHG4Q58EX7 1191 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 XKR9Q5GH70 373 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 ANO7Q6IWH7 933 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 OTOAQ7RTW8 1153 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 ANKMY2Q8IV38 441 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 STK32AQ8WU08 396 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 SPIRE2Q8WWL2 714 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 NUDCD1Q96RS6 583 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 DENND2DQ9H6A0 471 aaPredicted RBP12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 AGO4Q9HCK5 861 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 NPHS2Q9NP85 383 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 AVENQ9NQS1 362 aaPredicted RBP12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 TMX2Q9Y320 296 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 ATP9AO75110 1047 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 ATF7P17544 494 aaPredicted RBP12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 SLC1A1P43005 524 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 OVGP1Q12889 678 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 MAPK6Q16659 721 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 TKFCQ3LXA3 575 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 SCARA3Q6AZY7 606 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 KRT27Q7Z3Y8 459 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 PODNQ7Z5L7 613 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 RELL1Q8IUW5 271 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 RHOT1Q8IXI2 618 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 ZBED8Q8IZ13 594 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 LRRC8CQ8TDW0 803 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 FAM213AQ9BRX8 229 aa12.42□□□□□ -0.42
PDZRN3-203ENST00000462146 CLRN2A0PK11 232 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 DNALI1O14645 258 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 PRPF4O43172 522 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ABHD2P08910 425 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ARSEP51690 589 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 GPS1Q13098 491 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ZFYVE27Q5T4F4 411 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 LVRNQ6Q4G3 990 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 MAP4K3Q8IVH8 894 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 TAB3Q8N5C8 712 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ZNF483Q8TF39 744 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 MFSD14AQ96MC6 490 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 CFAP57Q96MR6 1250 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 SMC6Q96SB8 1091 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 MIPEPQ99797 713 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ST6GALNAC4Q9H4F1 302 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 C10orf88Q9H8K7 445 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 UBN1Q9NPG3 1134 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms