RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 WHRNQ9P202 907 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 AMACRQ9UHK6 382 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 FBXL5Q9UKA1 691 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 COL5A3P25940 1745 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 HNRNPCL1O60812 293 aaKnown RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ITGA4P13612 1032 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ERVK-24P63145 666 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ZPBP2Q6X784 338 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ZNF185O15231 689 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 SLITRK3O94933 977 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 STX1BP61266 288 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 LRRC10BA6NIK2 292 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 GPR182O15218 404 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 SLC30A5Q8TAD4 765 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 SOCS4Q8WXH5 440 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 RNF25Q96BH1 459 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 IFT43Q96FT9 208 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 LRRC1Q9BTT6 524 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 NSMCE4AQ9NXX6 385 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 CYP11B1P15538 503 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 SAT1P21673 171 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 PPIL2Q13356 520 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 CCDC38Q502W7 563 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 NBPF12Q5TAG4 269 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 PITPNM3Q9BZ71 974 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 MRPL40Q9NQ50 206 aaKnown RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 RRP15Q9Y3B9 282 aaKnown RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 RPS6KA5O75582 802 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 CYP2C9P11712 490 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 SLCO1A2P46721 670 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 TPI1P60174 286 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 C9orf131Q5VYM1 1079 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 MMS22LQ6ZRQ5 1243 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 HINFPQ9BQA5 517 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 POLD4Q9HCU8 107 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 CREB3O43889 395 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 CDH16O75309 829 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 SNHG28P0DPA3 235 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 AXLP30530 894 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 ZNF211Q13398 564 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 VEPH1Q14D04 833 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 ERP44Q9BS26 406 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 RABEP2Q9H5N1 569 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 LOC102724159A0A0B4J2E5 919 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 TOMM70O94826 608 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 HERVK_113P62684 666 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 PWP2Q15269 919 aaKnown RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 RIOX2Q8IUF8 465 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 ZNF526Q8TF50 670 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 AFG1LQ8WV93 481 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 PRPF31Q8WWY3 499 aaKnown RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 WDR18Q9BV38 432 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 TRIM55Q9BYV6 548 aa12.15□□□□□ -0.46
PTCH1-208ENST00000430669 DHX35Q9H5Z1 703 aaKnown RBP12.15□□□□□ -0.46
PTCH1-208ENST00000430669 CELF2O95319 508 aaKnown RBP12.15□□□□□ -0.47
PTCH1-208ENST00000430669 ALDH5A1P51649 535 aaPredicted RBP12.15□□□□□ -0.47
PTCH1-208ENST00000430669 TTC19Q6DKK2 380 aaPredicted RBP12.15□□□□□ -0.47
PTCH1-208ENST00000430669 PAK5Q9P286 719 aa12.15□□□□□ -0.47
PTCH1-208ENST00000430669 ADORA2BP29275 332 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 FSCBQ5H9T9 825 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 BTBD8Q5XKL5 378 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 TARS2Q9BW92 718 aaKnown RBP12.14□□□□□ -0.47
PTCH1-208ENST00000430669 ARHGAP42A6NI28 874 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 CHEK2O96017 543 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 GPD1P21695 349 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 RARRES1P49788 294 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 LAMTOR4Q0VGL1 99 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 EARS2Q5JPH6 523 aaKnown RBP12.14□□□□□ -0.47
PTCH1-208ENST00000430669 GPAT2Q6NUI2 795 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 INPP5FQ9Y2H2 1132 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 ALG6Q9Y672 507 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 LCP1P13796 627 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 DBN1Q16643 649 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 SP110Q9HB58 689 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 UBN1Q9NPG3 1134 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 C6orf222P0C671 652 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-208ENST00000430669 GNL1P36915 607 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-208ENST00000430669 GRIK1P39086 918 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 SULT1E1P49888 294 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 NME3Q13232 169 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 SCN4BQ8IWT1 228 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 TTC8Q8TAM2 541 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 HDAC11Q96DB2 347 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 KIF9Q9HAQ2 790 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-208ENST00000430669 AKAP3O75969 853 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 TAF6P49848 677 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 ZDHHC17Q8IUH5 632 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 WDR75Q8IWA0 830 aaKnown RBP12.14□□□□□ -0.47
PTCH1-208ENST00000430669 CATSPERBQ9H7T0 1116 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 UBQLN1Q9UMX0 589 aaKnown RBP12.14□□□□□ -0.47
PTCH1-208ENST00000430669 KCNN4O15554 427 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 COMTP21964 271 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 PDK2Q15119 407 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 GDAP1Q8TB36 358 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 TSPAN18Q96SJ8 248 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 PDCD2LQ9BRP1 358 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 BAIAP2L1Q9UHR4 511 aa12.14□□□□□ -0.47
PTCH1-208ENST00000430669 TPX2Q9ULW0 747 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms