RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 O00370 1275 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 RASGRF2O14827 1237 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 TP73O15350 636 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 TLR3O15455 904 aaKnown RBP17.89■□□□□ 0.45
NUP50-203ENST00000407019 TOM1L1O75674 476 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 TGFB3P10600 412 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 ATF2P15336 505 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 TNFSF9P41273 254 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 ZNF568Q3ZCX4 644 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 ERMARDQ5T6L9 678 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 ZBTB33Q86T24 672 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 FEZF2Q8TBJ5 459 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 ROPN1BQ9BZX4 212 aaPredicted RBP17.89■□□□□ 0.45
NUP50-203ENST00000407019 CDC42EP4Q9H3Q1 356 aaKnown RBP17.89■□□□□ 0.45
NUP50-203ENST00000407019 ROPN1Q9HAT0 212 aaPredicted RBP17.89■□□□□ 0.45
NUP50-203ENST00000407019 AAASQ9NRG9 546 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 R3HDM2Q9Y2K5 976 aaKnown RBP17.89■□□□□ 0.45
NUP50-203ENST00000407019 TTLL13PA6NNM8 815 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 ASS1P00966 412 aaKnown RBP17.89■□□□□ 0.45
NUP50-203ENST00000407019 CHN1P15882 459 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 IFI35P80217 286 aaPredicted RBP17.89■□□□□ 0.45
NUP50-203ENST00000407019 CAV1Q03135 178 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 IER5Q5VY09 327 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 ZNF606Q8WXB4 792 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 TCHPQ9BT92 498 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 HEMGNQ9BXL5 484 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 OSBPL8Q9BZF1 889 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 CCDC113Q9H0I3 377 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 IP6K2Q9UHH9 426 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 USTQ9Y2C2 406 aa17.89■□□□□ 0.45
NUP50-203ENST00000407019 FAM189A1O60320 539 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 MSCO60682 206 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 IVDP26440 423 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 GJC1P36383 396 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 SSR1P43307 286 aaKnown RBP17.88■□□□□ 0.45
NUP50-203ENST00000407019 SLCO1A2P46721 670 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 ITGA8P53708 1063 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 CCNG2Q16589 344 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 QPCTQ16769 361 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 CDCA2Q69YH5 1023 aaPredicted RBP17.88■□□□□ 0.45
NUP50-203ENST00000407019 GPC2Q8N158 579 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 EXD1Q8NHP7 514 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 TCP11Q8WWU5 503 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 SCLT1Q96NL6 688 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 ADAM7Q9H2U9 754 aa17.88■□□□□ 0.45
NUP50-203ENST00000407019 DDX20Q9UHI6 824 aaKnown RBP17.88■□□□□ 0.45
NUP50-203ENST00000407019 CST3P01034 146 aaPredicted RBP17.87■□□□□ 0.45
NUP50-203ENST00000407019 MMP8P22894 467 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 CHKAP35790 457 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 AUHQ13825 339 aaKnown RBP17.87■□□□□ 0.45
NUP50-203ENST00000407019 TRIP13Q15645 432 aaPredicted RBP17.87■□□□□ 0.45
NUP50-203ENST00000407019 LY6KQ17RY6 165 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 TNFAIP8L3Q5GJ75 292 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 SCARA3Q6AZY7 606 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 C6orf89Q6UWU4 347 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 GADL1Q6ZQY3 521 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 EEPD1Q7L9B9 569 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 ZBTB8OSQ8IWT0 167 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 CNKSR2Q8WXI2 1034 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 BBXQ8WY36 941 aaPredicted RBP17.87■□□□□ 0.45
NUP50-203ENST00000407019 DDX23Q9BUQ8 820 aaKnown RBP17.87■□□□□ 0.45
NUP50-203ENST00000407019 TRAIPQ9BWF2 469 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 MTMR12Q9C0I1 747 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 CSADQ9Y600 493 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 OGTO15294 1046 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 GAS2O43903 313 aaKnown RBP17.87■□□□□ 0.45
NUP50-203ENST00000407019 GJB6O95452 261 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 PRKCBP05771 671 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 CD58P19256 250 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 ADCY8P40145 1251 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 CETN2P41208 172 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 IFT88Q13099 833 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 PACS2Q86VP3 889 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 CHMP6Q96FZ7 201 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 ACO2Q99798 780 aaKnown RBP17.87■□□□□ 0.45
NUP50-203ENST00000407019 NIF3L1Q9GZT8 377 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 ANAPC5Q9UJX4 755 aa17.87■□□□□ 0.45
NUP50-203ENST00000407019 LRRC37A2A6NM11 1700 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 ACSL3O95573 720 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 LSM8O95777 96 aaKnown RBP17.86■□□□□ 0.45
NUP50-203ENST00000407019 CALB1P05937 261 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 PTPRFP10586 1907 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 MARK3P27448 753 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 MYL6P60660 151 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 IRX3P78415 501 aaPredicted RBP17.86■□□□□ 0.45
NUP50-203ENST00000407019 LAMTOR4Q0VGL1 99 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 MXD4Q14582 209 aaPredicted RBP17.86■□□□□ 0.45
NUP50-203ENST00000407019 SURF1Q15526 300 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 MAPK6Q16659 721 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 RNF187Q5TA31 235 aaPredicted RBP17.86■□□□□ 0.45
NUP50-203ENST00000407019 ZNF365Q70YC5 407 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 TAOK1Q7L7X3 1001 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 CPLX4Q7Z7G2 160 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 BBOF1Q8ND07 529 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 FAM212AQ96EL1 285 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 NEU2Q9Y3R4 380 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 SRGAP2CP0DJJ0 459 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 DRD4P21917 467 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 MCL1Q07820 350 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms