RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 HADHAP40939 763 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 ACADSBP45954 432 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 IREB2P48200 963 aaKnown RBP10.03□□□□□ -0.8
SNX1-202ENST00000380285 KRT33BQ14525 404 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 PDK1Q15118 436 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 SGSM1Q2NKQ1 1148 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 LINC00523Q86TU6 105 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 RAB42Q8N4Z0 105 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 ENGASEQ8NFI3 743 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 TPCN2Q8NHX9 752 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 TRIM51Q9BSJ1 452 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 DBR1Q9UK59 544 aaKnown RBP10.03□□□□□ -0.8
SNX1-202ENST00000380285 SAC3D1A6NKF1 404 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 ALBP02768 609 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 MXD4Q14582 209 aaPredicted RBP10.03□□□□□ -0.8
SNX1-202ENST00000380285 IGDCC4Q8TDY8 1250 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 ZFRQ96KR1 1074 aaKnown RBP10.03□□□□□ -0.8
SNX1-202ENST00000380285 AGPAT5Q9NUQ2 364 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 HSPBP1Q9NZL4 362 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 PCDHA10Q9Y5I2 948 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 IL18RAPO95256 599 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 MUTP22033 750 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 HMOX2P30519 316 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 SLC29A2Q14542 456 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 RNF219Q5W0B1 726 aaPredicted RBP10.03□□□□□ -0.8
SNX1-202ENST00000380285 PCDHB8Q9UN66 801 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 ZNF609O15014 1411 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 THRAP10827 490 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 ENO3P13929 434 aaPredicted RBP10.03□□□□□ -0.8
SNX1-202ENST00000380285 FDFT1P37268 417 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 TADA1Q96BN2 335 aa10.03□□□□□ -0.8
SNX1-202ENST00000380285 CNOT7Q9UIV1 285 aaKnown RBP10.03□□□□□ -0.8
SNX1-202ENST00000380285 CLK1P49759 484 aaKnown RBP10.02□□□□□ -0.8
SNX1-202ENST00000380285 CCDC15Q0P6D6 951 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 GRM1Q13255 1194 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 LBRQ14739 615 aaKnown RBP10.02□□□□□ -0.8
SNX1-202ENST00000380285 TTC33Q6PID6 262 aaPredicted RBP10.02□□□□□ -0.8
SNX1-202ENST00000380285 NOA1Q8NC60 698 aaKnown RBP10.02□□□□□ -0.8
SNX1-202ENST00000380285 OR6P1Q8NGX9 317 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 IRX2Q9BZI1 471 aaPredicted RBP10.02□□□□□ -0.8
SNX1-202ENST00000380285 KCND1Q9NSA2 647 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 NEXMIFQ5QGS0 1516 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 ROBO2Q9HCK4 1378 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 CYP26A1O43174 497 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 SLC20A2Q08357 652 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 PRKG1Q13976 671 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 RCN1Q15293 331 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 THNSL1Q8IYQ7 743 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 TMA16Q96EY4 203 aaKnown RBP10.02□□□□□ -0.8
SNX1-202ENST00000380285 ZNF341Q9BYN7 854 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 ZNF408Q9H9D4 720 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 RAB6BQ9NRW1 208 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 DTNAQ9Y4J8 743 aa10.02□□□□□ -0.8
SNX1-202ENST00000380285 LTKP29376 864 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 SOX6P35712 828 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 PID1Q7Z2X4 250 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 SCFD2Q8WU76 684 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 ISCA1Q9BUE6 129 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 UNC45AQ9H3U1 944 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 GOLPH3Q9H4A6 298 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 SMARCAL1Q9NZC9 954 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 SLC24A2Q9UI40 661 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L15C9J2P7 530 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L13C9JLJ4 530 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L11C9JVI0 530 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L18D6R9N7 530 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L22D6RA61 530 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L17D6RBQ6 530 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L19D6RCP7 530 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L20D6RJB6 530 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 ITGA8P53708 1063 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 TPI1P60174 286 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L24Q0WX57 530 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 PTK6Q13882 451 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 SYCP2LQ5T4T6 812 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 ACBD5Q5T8D3 534 aaPredicted RBP10.02□□□□□ -0.81
SNX1-202ENST00000380285 DEPDC1Q5TB30 811 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 OLFML2BQ68BL8 750 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 USP17L6PQ6QN14 398 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 LUZP2Q86TE4 346 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 MSL3Q8N5Y2 521 aaKnown RBP10.02□□□□□ -0.81
SNX1-202ENST00000380285 MMTAG2Q9BU76 263 aaKnown RBP10.02□□□□□ -0.81
SNX1-202ENST00000380285 KLHL4Q9C0H6 718 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 C17orf75Q9HAS0 396 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 PLEKHA5Q9HAU0 1116 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 STMN3Q9NZ72 180 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 GGA2Q9UJY4 613 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 GTF3C4Q9UKN8 822 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 hCG_2014768A0A024R1R8 64 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 PSMC3P17980 439 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 EAPPQ56P03 285 aaPredicted RBP10.02□□□□□ -0.81
SNX1-202ENST00000380285 BBS7Q8IWZ6 715 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 DAGLBQ8NCG7 672 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 GIMAP4Q9NUV9 329 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 MINPP1Q9UNW1 487 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 KDM6AO15550 1401 aaPredicted RBP10.02□□□□□ -0.81
SNX1-202ENST00000380285 PRR23D1E9PI22 279 aaPredicted RBP10.02□□□□□ -0.81
SNX1-202ENST00000380285 GH2P01242 217 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 WEE2P0C1S8 567 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms