RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ZC2HC1CQ53FD0 456 aaPredicted RBP20.48■□□□□ 0.87
TMEM53-201ENST00000372235 L1TD1Q5T7N2 865 aaKnown RBP20.48■□□□□ 0.87
TMEM53-201ENST00000372235 JADE1Q6IE81 842 aa20.48■□□□□ 0.87
TMEM53-201ENST00000372235 ARMCX5Q6P1M9 558 aa20.48■□□□□ 0.87
TMEM53-201ENST00000372235 RSAD2Q8WXG1 361 aa20.48■□□□□ 0.87
TMEM53-201ENST00000372235 TNMDQ9H2S6 317 aa20.48■□□□□ 0.87
TMEM53-201ENST00000372235 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
TMEM53-201ENST00000372235 INSL5Q9Y5Q6 135 aa20.48■□□□□ 0.87
TMEM53-201ENST00000372235 PPP1R37O75864 691 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 GCNT3O95395 438 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 CFHP08603 1231 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 GARTP22102 1010 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 MRE11P49959 708 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 LILRA4P59901 499 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 SPAG1Q07617 926 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 ADCY1Q08828 1119 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 OVOS1Q6IE37 1185 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 PHLDB3Q6NSJ2 640 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 SLC39A4Q6P5W5 647 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 PDZD4Q76G19 769 aaPredicted RBP20.47■□□□□ 0.87
TMEM53-201ENST00000372235 ALYREFQ86V81 257 aaKnown RBP20.47■□□□□ 0.87
TMEM53-201ENST00000372235 METTL23Q86XA0 190 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 SYCP3Q8IZU3 236 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 TMEM105Q8N8V8 129 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 ATOH1Q92858 354 aaPredicted RBP20.47■□□□□ 0.87
TMEM53-201ENST00000372235 DNAJC19Q96DA6 116 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 PYM1Q9BRP8 204 aaKnown RBP20.47■□□□□ 0.87
TMEM53-201ENST00000372235 STRA6Q9BX79 667 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 MAGEF1Q9HAY2 307 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 PANK4Q9NVE7 773 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 HSFX1Q9UBD0 423 aa20.47■□□□□ 0.87
TMEM53-201ENST00000372235 FRMD3A2A2Y4 597 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 CUTAO60888 179 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 PNPLA4P41247 253 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 ACOT2P49753 483 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 NTHL1P78549 312 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 SMARCB1Q12824 385 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 C9orf57Q5W0N0 161 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 NPAS3Q8IXF0 933 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 IQUBQ8NA54 791 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 KCNG4Q8TDN1 519 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 CACTINQ8WUQ7 758 aaKnown RBP20.46■□□□□ 0.87
TMEM53-201ENST00000372235 GPR88Q9GZN0 384 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 CFAP45Q9UL16 551 aa20.46■□□□□ 0.87
TMEM53-201ENST00000372235 MUC6Q6W4X9 2439 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 ANKRD63C9JTQ0 380 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 PIRO00625 290 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 NARSO43776 548 aaKnown RBP20.45■□□□□ 0.86
TMEM53-201ENST00000372235 ECI2O75521 394 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 GPR17Q13304 367 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 ZBTB41Q5SVQ8 909 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 PARM1Q6UWI2 310 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 THEM5Q8N1Q8 247 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 ITFG1Q8TB96 612 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 ZNF560Q96MR9 790 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 CORO1BQ9BR76 489 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 ARHGEF3Q9NR81 526 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 HCFC1R1Q9NWW0 138 aa20.45■□□□□ 0.86
TMEM53-201ENST00000372235 ANO9A1A5B4 782 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 FGF19O95750 216 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 NFICP08651 508 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 NPR3P17342 541 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 ALDH1A3P47895 512 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 TAF6P49848 677 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 PRKCQQ04759 706 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 CWF19L1Q69YN2 538 aaKnown RBP20.44■□□□□ 0.86
TMEM53-201ENST00000372235 GPR152Q8TDT2 470 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 FGF14Q92915 247 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 SENP8Q96LD8 212 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 PANK2Q9BZ23 570 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 ASAH2Q9NR71 780 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 DPP3Q9NY33 737 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 ASB3Q9Y575 518 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 TRIOO75962 3097 aa20.44■□□□□ 0.86
TMEM53-201ENST00000372235 DOCK8Q8NF50 2099 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 SEC24AO95486 1093 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 CYP11A1P05108 521 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 EPHB3P54753 998 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 TWF1Q12792 350 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 SV2CQ496J9 727 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 RNF19BQ6ZMZ0 732 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 CCDC105Q8IYK2 499 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 PDILTQ8N807 584 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 C2orf15Q8WU43 125 aaKnown RBP20.43■□□□□ 0.86
TMEM53-201ENST00000372235 ELSPBP1Q96BH3 223 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 KBTBD4Q9NVX7 518 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 CA14Q9ULX7 337 aa20.43■□□□□ 0.86
TMEM53-201ENST00000372235 ZSCAN22P10073 491 aaPredicted RBP20.42■□□□□ 0.86
TMEM53-201ENST00000372235 ADSSP30520 456 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 TUFMP49411 452 aaKnown RBP20.42■□□□□ 0.86
TMEM53-201ENST00000372235 SURF1Q15526 300 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 ITIH5Q86UX2 942 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 E2F7Q96AV8 911 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 FAM213AQ9BRX8 229 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 TBC1D17Q9HA65 648 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 KIAA1586Q9HCI6 787 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 ZFP14Q9HCL3 533 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 FAM13BQ9NYF5 915 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 TBC1D7Q9P0N9 293 aa20.42■□□□□ 0.86
TMEM53-201ENST00000372235 SIT1Q9Y3P8 196 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms