RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 OCA2Q04671 838 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 LMBRD2Q68DH5 695 aaPredicted RBP16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 AADACL2Q6P093 401 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 LCA5Q86VQ0 697 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 ZC3H7BQ9UGR2 993 aaKnown RBP16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 F5H6K3 240 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 TMCC1O94876 653 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 CLPTM1O96005 669 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 KRT3P12035 628 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 QARSP47897 775 aaKnown RBP16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 KLRC3Q07444 240 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 TMEM179Q6ZVK1 233 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 KCNK18Q7Z418 384 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 CCDC134Q9H6E4 229 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 LZTS1Q9Y250 596 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 BTNL10A8MVZ5 291 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 PDE5AO76074 875 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 COPAP53621 1224 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 ACAD10Q6JQN1 1059 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 ANKRD36BP1Q96IX9 119 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 SH2D3AQ9BRG2 576 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 SLC12A6Q9UHW9 1150 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 UBE4BO95155 1302 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 TRIM49D1C9J1S8 452 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 FKBP6O75344 327 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 EIF2AK2P19525 551 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 ARL4AP40617 200 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 NFX1Q12986 1120 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 SMAD1Q15797 465 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 TRAPPC9Q96Q05 1148 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 PCDHB2Q9Y5E7 798 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 ZBBXA8MT70 800 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 SMIM22K7EJ46 135 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 TBXAS1P24557 533 aaPredicted RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 SKIV2L2P42285 1042 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 TEDDM1Q5T9Z0 273 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 FAM196AQ6ZSG2 479 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 ADPGKQ9BRR6 497 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 TCP10L2B9ZVM9 353 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 XPO1O14980 1071 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 LCA5LO95447 670 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 PSMG1O95456 288 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 PSMC1P62191 440 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 PRAMEP78395 509 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 SNRNP35Q16560 246 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 PCNX4Q63HM2 1172 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 FBXO33Q7Z6M2 555 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 LRRC6Q86X45 466 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 TMPRSS6Q8IU80 811 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 NDUFAF2Q8N183 169 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 MRPL40Q9NQ50 206 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 SLC24A2Q9UI40 661 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 STARD13Q9Y3M8 1113 aa16.78■□□□□ 0.28
CLSTN1-201ENST00000361311 A8MXQ7 604 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 AIM2O14862 343 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 BCAR1P56945 870 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 IFRD2Q12894 506 aaPredicted RBP16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 ZNF268Q14587 947 aaPredicted RBP16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 ZBTB33Q86T24 672 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 RAB6BQ9NRW1 208 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 ZNF212Q9UDV6 495 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 ENO3P13929 434 aaPredicted RBP16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 ABCD1P33897 745 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 ATXN3P54252 364 aaPredicted RBP16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 OCRLQ01968 901 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 PKN2Q16513 984 aaKnown RBP16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 SLC45A4Q5BKX6 768 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 HGSNATQ68CP4 663 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 SLFN12LQ6IEE8 588 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 GANQ9H2C0 597 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 LRRC4BQ9NT99 713 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 TMEM131LA2VDJ0 1609 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 FCHO1O14526 889 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 TBCCQ15814 346 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 MIS18BP1Q6P0N0 1132 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 KRT27Q7Z3Y8 459 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 PPIL6Q8IXY8 311 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 SLC25A41Q8N5S1 370 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 PRELID2Q8N945 189 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 ZNF75CPQ92670 426 aaPredicted RBP16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 FAM149B1Q96BN6 582 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 HES6Q96HZ4 224 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 MPP4Q96JB8 637 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 ASNSD1Q9NWL6 643 aa16.77■□□□□ 0.28
CLSTN1-201ENST00000361311 RBAK-RBAKDNI3L0D1 243 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 GH2P01242 217 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 TMED10P49755 219 aaKnown RBP16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 CACNB3P54284 484 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 BNIP1Q12981 228 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 CEP55Q53EZ4 464 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 C2CD6Q53TS8 623 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 CNBD2Q96M20 576 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 PAFAH2Q99487 392 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 DNAJC18Q9H819 358 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 AFG3L2Q9Y4W6 797 aa16.77■□□□□ 0.27
CLSTN1-201ENST00000361311 H0YIN7 160 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms