RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 ZNF365Q70YC5 407 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 TRPM8Q7Z2W7 1104 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 SENP7Q9BQF6 1050 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 HOMER3Q9NSC5 361 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 FBXO40Q9UH90 709 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 ZSCAN5DPP0CG00 497 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 SLC8A1P32418 973 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 NOMO3P69849 1222 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 TMEM132BQ14DG7 1078 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 ZNF394Q53GI3 561 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 IZUMO3Q5VZ72 239 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 NUGGCQ68CJ6 796 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 RDM1Q8NG50 284 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 SERPINB12Q96P63 405 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 TRAIPQ9BWF2 469 aa16.06■□□□□ 0.16
CSDC2-201ENST00000306149 MYH9P35579 1960 aaKnown RBP16.06■□□□□ 0.16
CSDC2-201ENST00000306149 TTLL13PA6NNM8 815 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 ZC3H11AO75152 810 aaKnown RBP eCLIP16.05■□□□□ 0.16
CSDC2-201ENST00000306149 BRAFP15056 766 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 BACE1P56817 501 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 HIBCHQ6NVY1 386 aaPredicted RBP16.05■□□□□ 0.16
CSDC2-201ENST00000306149 RHOT1Q8IXI2 618 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 SRRM1Q8IYB3 904 aaKnown RBP16.05■□□□□ 0.16
CSDC2-201ENST00000306149 ABRAQ8N0Z2 381 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 RBBP8NLQ8NC74 664 aaPredicted RBP16.05■□□□□ 0.16
CSDC2-201ENST00000306149 FAM81BQ96LP2 452 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 ZNF214Q9UL59 606 aaPredicted RBP16.05■□□□□ 0.16
CSDC2-201ENST00000306149 ARID2Q68CP9 1835 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 GSTTP1A0A1W2PQM5 241 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 CFAP73A6NFT4 308 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 K7ERI5 159 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 SNX3O60493 162 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 ETS1P14921 441 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 ATP5DP30049 168 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 CAPN12Q6ZSI9 719 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 SYDE1Q6ZW31 735 aaPredicted RBP16.05■□□□□ 0.16
CSDC2-201ENST00000306149 GRK7Q8WTQ7 553 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 HAUS1Q96CS2 278 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 MSTO1Q9BUK6 570 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 ADAM33Q9BZ11 813 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 FHDC1Q9C0D6 1143 aaPredicted RBP16.05■□□□□ 0.16
CSDC2-201ENST00000306149 CXorf56Q9H5V9 222 aa16.05■□□□□ 0.16
CSDC2-201ENST00000306149 MYBL1P10243 752 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 ATF7P17544 494 aaPredicted RBP16.04■□□□□ 0.16
CSDC2-201ENST00000306149 GLRA2P23416 452 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 BPIFB4P59827 614 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 P3H1Q32P28 736 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 LIN9Q5TKA1 542 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 CEP57Q86XR8 500 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 GPATCH11Q8N954 259 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 CYP39A1Q9NYL5 469 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 HACL1Q9UJ83 578 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 AGAP1Q9UPQ3 857 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 NAALADL1Q9UQQ1 740 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 NEU2Q9Y3R4 380 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 ATP6V1G2O95670 118 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 CST3P01034 146 aaPredicted RBP16.04■□□□□ 0.16
CSDC2-201ENST00000306149 MAN1A1P33908 653 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 PSMC4P43686 418 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 NOP14P78316 857 aaKnown RBP16.04■□□□□ 0.16
CSDC2-201ENST00000306149 CLDN10P78369 228 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 TBC1D1Q86TI0 1168 aaPredicted RBP16.04■□□□□ 0.16
CSDC2-201ENST00000306149 ZNF677Q86XU0 584 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 CCDC63Q8NA47 563 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 REPS2Q8NFH8 660 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.04■□□□□ 0.16
CSDC2-201ENST00000306149 DEPTORQ8TB45 409 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 MAIP1Q8WWC4 291 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 MRRFQ96E11 262 aaKnown RBP16.04■□□□□ 0.16
CSDC2-201ENST00000306149 FAM212AQ96EL1 285 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 COL11A1P12107 1806 aaPredicted RBP16.04■□□□□ 0.16
CSDC2-201ENST00000306149 TNFAIP1Q13829 316 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 CCNG2Q16589 344 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 XKR3Q5GH77 459 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 TXNRD3NBQ6F5E7 133 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 JDP2Q8WYK2 163 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 TRIM11Q96F44 468 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 WRNIP1Q96S55 665 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 DNPEPQ9ULA0 475 aa16.04■□□□□ 0.16
CSDC2-201ENST00000306149 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.04■□□□□ 0.16
CSDC2-201ENST00000306149 MAFGO15525 162 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 UBOX5O94941 541 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 SUPT20HL2P0C7V6 817 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 TNFSF9P41273 254 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 PTP4A2Q12974 167 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 SUPT20HL1Q3ZLR7 823 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 MIS18BP1Q6P0N0 1132 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 ZBTB33Q86T24 672 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 TCP11Q8WWU5 503 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 F8VP50 259 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 CLTAP09496 248 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 EZRP15311 586 aaKnown RBP16.03■□□□□ 0.16
CSDC2-201ENST00000306149 RTP1P59025 263 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 CNTN2Q02246 1040 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 RIPK1Q13546 671 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 E2F5Q15329 346 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 ZNF280CQ8ND82 737 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 GIMAP7Q8NHV1 300 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 ZNF606Q8WXB4 792 aa16.03■□□□□ 0.16
CSDC2-201ENST00000306149 RBM15Q96T37 977 aaKnown RBP eCLIP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms