RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CPA4Q9UI42 421 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 NCANO14594 1321 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 E9PLN8 166 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 TRIM24O15164 1050 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 DNAJB5O75953 348 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 AGFG2O95081 481 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 ABHD16AO95870 558 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 CHEK2O96017 543 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 ITGB1P05556 798 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 NBPF7P0C2Y1 421 aaPredicted RBP5.55□□□□□ -1.52
CCDC54-201ENST00000261058 KITP10721 976 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 CKBP12277 381 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 ALDH5A1P51649 535 aaPredicted RBP5.55□□□□□ -1.52
CCDC54-201ENST00000261058 PTTG1IPP53801 180 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 CTSWP56202 376 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 RHBDL3P58872 404 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 NOMO3P69849 1222 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 NHLH2Q02577 135 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 EFEMP1Q12805 493 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 PICALMQ13492 652 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 HDAC1Q13547 482 aaPredicted RBP5.55□□□□□ -1.52
CCDC54-201ENST00000261058 NOMO2Q5JPE7 1267 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 SYCP2LQ5T4T6 812 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 SAMD3Q8N6K7 520 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 SUCLG2Q96I99 432 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 DCLRE1CQ96SD1 692 aaKnown RBP5.55□□□□□ -1.52
CCDC54-201ENST00000261058 STRBPQ96SI9 672 aaKnown RBP5.55□□□□□ -1.52
CCDC54-201ENST00000261058 ADOQ96SZ5 270 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 P2RX7Q99572 595 aaKnown RBP5.55□□□□□ -1.52
CCDC54-201ENST00000261058 VKORC1Q9BQB6 163 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 ZNF703Q9H7S9 590 aaPredicted RBP5.55□□□□□ -1.52
CCDC54-201ENST00000261058 SMURF2Q9HAU4 748 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 CNNM1Q9NRU3 951 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 AURKAIP1Q9NWT8 199 aaPredicted RBP5.55□□□□□ -1.52
CCDC54-201ENST00000261058 STK32BQ9NY57 414 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 ST6GALNAC2Q9UJ37 374 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 PHTF1Q9UMS5 762 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 TCAF1Q9Y4C2 921 aa5.55□□□□□ -1.52
CCDC54-201ENST00000261058 MARCH11A6NNE9 402 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 FOXN3O00409 490 aaPredicted RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 PRRG2O14669 202 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 PQBP1O60828 265 aaKnown RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 FCER1AP12319 257 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 SLC7A1P30825 629 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 APOBEC3AP31941 199 aaPredicted RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 CASP5P51878 434 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 NEK3P51956 506 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 POU6F2P78424 691 aaPredicted RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 FMO1Q01740 532 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 PLP2Q04941 152 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 TOB2Q14106 344 aaPredicted RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 HABP2Q14520 560 aaPredicted RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 CDSNQ15517 529 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 CNGA2Q16280 664 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 PPP4R4Q6NUP7 873 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 LRRC55Q6ZSA7 311 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 TMPRSS6Q8IU80 811 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 AOPEPQ8N6M6 819 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 TBC1D15Q8TC07 691 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 MAML1Q92585 1016 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 DDX17Q92841 729 aaKnown RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 NMD3Q96D46 503 aaKnown RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 LOXL4Q96JB6 756 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 ZC3H10Q96K80 434 aaKnown RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 TINAGL1Q9GZM7 467 aaPredicted RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 KLC2Q9H0B6 622 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 VSX1Q9NZR4 365 aaPredicted RBP5.54□□□□□ -1.52
CCDC54-201ENST00000261058 AGAP1Q9UPQ3 857 aa5.54□□□□□ -1.52
CCDC54-201ENST00000261058 ZNF785A8K8V0 405 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 AHRRA9YTQ3 701 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 FOXD2O60548 495 aaPredicted RBP5.53□□□□□ -1.52
CCDC54-201ENST00000261058 THP07101 528 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 FDXRP22570 491 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 PIK3CBP42338 1070 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 PHKA1P46020 1223 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 HTR3AP46098 478 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 PRKD1Q15139 912 aaPredicted RBP5.53□□□□□ -1.52
CCDC54-201ENST00000261058 CRB2Q5IJ48 1285 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 ERICH6BQ5W0A0 696 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 ZNF585AQ6P3V2 769 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 TMPRSS9Q7Z410 1059 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 SESTD1Q86VW0 696 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 PDPRQ8NCN5 879 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 PGBD4Q96DM1 585 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 APOL5Q9BWW9 433 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 TLR10Q9BXR5 811 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 SMPD4Q9NXE4 827 aa5.53□□□□□ -1.52
CCDC54-201ENST00000261058 CCDC78A2IDD5 438 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 TRIM43BA6NCK2 446 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 B8ZZF3 427 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 PLSCR1O15162 318 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 ZNF185O15231 689 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 GNAI2P04899 355 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 ZNF135P52742 658 aaPredicted RBP5.52□□□□□ -1.53
CCDC54-201ENST00000261058 AK2P54819 239 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 PSMC1P62191 440 aaKnown RBP5.52□□□□□ -1.53
CCDC54-201ENST00000261058 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 USP37Q86T82 979 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 Q8NA96 180 aa5.52□□□□□ -1.53
CCDC54-201ENST00000261058 OR56A1Q8NGH5 318 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms